RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 PPP1R13LQ8WUF5 828 aa12.79□□□□□ -0.36
HPS1-204ENST00000361490 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
HPS1-204ENST00000361490 WDR64B1ANS9 1081 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 DSG3P32926 999 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 EPHA7Q15375 998 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 ANKFY1Q9P2R3 1169 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 EPN1Q9Y6I3 576 aaPredicted RBP12.78□□□□□ -0.36
HPS1-204ENST00000361490 ACTN1P12814 892 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 CASP4P49662 377 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
HPS1-204ENST00000361490 Q4G0T1 1027 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 CARD6Q9BX69 1037 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 TISP43B9A030 160 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 TBX3O15119 743 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 LRRN2O75325 713 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 TMTC1Q8IUR5 882 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
HPS1-204ENST00000361490 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 ATRIPQ8WXE1 791 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
HPS1-204ENST00000361490 ZNF215Q9UL58 517 aaPredicted RBP12.78□□□□□ -0.36
HPS1-204ENST00000361490 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.36
HPS1-204ENST00000361490 NR3C1P04150 777 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.36
HPS1-204ENST00000361490 PSMD2Q13200 908 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 CDKAL1Q5VV42 579 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 OTUD6AQ7L8S5 288 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 ELOA2Q8IYF1 753 aaPredicted RBP12.77□□□□□ -0.36
HPS1-204ENST00000361490 FAM186BQ8IYM0 893 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.36
HPS1-204ENST00000361490 TMEM143Q96AN5 459 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 SAAL1Q96ER3 474 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 PLEKHA4Q9H4M7 779 aa12.77□□□□□ -0.36
HPS1-204ENST00000361490 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 LRRC63Q05C16 580 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 KIF5AQ12840 1032 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 LENG9Q96B70 501 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 IFT74Q96LB3 600 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 PCDHA10Q9Y5I2 948 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 JPH1Q9HDC5 661 aaPredicted RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 KMT5AQ9NQR1 393 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 LIMA1Q9UHB6 759 aaKnown RBP12.77□□□□□ -0.37
HPS1-204ENST00000361490 ZNF536O15090 1300 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.37
HPS1-204ENST00000361490 BUB1O43683 1085 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 OSBPP22059 807 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 OSTNP61366 133 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 DMP1Q13316 513 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 BIRC3Q13489 604 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 IRF2BP1Q8IU81 584 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 POMGNT1Q8WZA1 660 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 ATP6V0A1Q93050 837 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 ASCC2Q9H1I8 757 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 COL4A5P29400 1685 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 IQCA1LA6NCM1 817 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 KLHL30Q0D2K2 578 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 KIF2AO00139 706 aaPredicted RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 PSMD10O75832 226 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 HERVK_113P62684 666 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 CETN1Q12798 172 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
HPS1-204ENST00000361490 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
HPS1-204ENST00000361490 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
HPS1-204ENST00000361490 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
HPS1-204ENST00000361490 GGPS1O95749 300 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms