RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 COG2Q14746 738 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 MFSD14CQ5VZR4 134 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 FAM151AQ8WW52 585 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 MMP19Q99542 508 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 KYAT1Q16773 422 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 CNOT7Q9UIV1 285 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 NMT2O60551 498 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 PDIA5Q14554 519 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 EPHA7Q15375 998 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 MB21D1Q8N884 522 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
LDB3-202ENST00000361373 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
LDB3-202ENST00000361373 MYL3P08590 195 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 RSBN1LQ6PCB5 846 aaPredicted RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 DSTYKQ6XUX3 929 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 FAM49AQ9H0Q0 323 aaPredicted RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 MCF2LO15068 1137 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 ELF1P32519 619 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 RASSF2P50749 326 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 TPD52P55327 224 aaPredicted RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 EXOSC10Q01780 885 aaKnown RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 GABPB1Q06547 395 aaPredicted RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 SLFNL1Q499Z3 407 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 MICALL2Q8IY33 904 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 KIAA1210Q9ULL0 1709 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 FLT1P17948 1338 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 MARK3P27448 753 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 CDC27P30260 824 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 LDHDQ86WU2 507 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 PPP1R13BQ96KQ4 1090 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 MTRQ99707 1265 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 MED4Q9NPJ6 270 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 CEP170BQ9Y4F5 1589 aaPredicted RBP14.56□□□□□ -0.08
LDB3-202ENST00000361373 CPS1P31327 1500 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 POTEMA6NI47 508 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 VPS41P49754 854 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 CDC42EP1Q00587 391 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 KRT31Q15323 416 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 CEP85LQ5SZL2 805 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 SARM1Q6SZW1 724 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 BPIFA3Q9BQP9 254 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 DAAM1Q9Y4D1 1078 aa14.56□□□□□ -0.08
LDB3-202ENST00000361373 SMARCA1P28370 1054 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 EIF4A3P38919 411 aaKnown RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 GUCY2FP51841 1108 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 ATP11AP98196 1134 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 ARL13BQ3SXY8 428 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 SLC35F6Q8N357 371 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 CHAMP1Q96JM3 812 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 SEPT10Q9P0V9 454 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 GOLGA8SH3BPF8 625 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 NR3C1P04150 777 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 AP3M2P53677 418 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 ITPK1Q13572 414 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 KAZNQ674X7 775 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 OR6B2Q6IFH4 312 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 GUF1Q8N442 669 aaKnown RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 MCUR1Q96AQ8 359 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 DPH5Q9H2P9 285 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 PCDHA10Q9Y5I2 948 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 KIAA0391O15091 583 aaKnown RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 PRPSAP2O60256 369 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 NFX1Q12986 1120 aaKnown RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 CEP55Q53EZ4 464 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 NHEJ1Q9H9Q4 299 aaPredicted RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 NDUFA10O95299 355 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 CIITAP33076 1130 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 ATP2C1P98194 919 aaPredicted RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 THEM5Q8N1Q8 247 aa14.55□□□□□ -0.08
LDB3-202ENST00000361373 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
LDB3-202ENST00000361373 NAALADL2Q58DX5 795 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 KCTD17Q8N5Z5 321 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 DYDC2Q96IM9 177 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TUFT1Q9NNX1 390 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TBX3O15119 743 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 XPAP23025 273 aaPredicted RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 KNOP1Q1ED39 458 aaKnown RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 ALKBH5Q6P6C2 394 aaKnown RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 GAS2L3Q86XJ1 694 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TMEM35BQ8NCS4 154 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 AGBL3Q8NEM8 1001 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 CEP72Q9P209 647 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 DIS3Q9Y2L1 958 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms