RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SLU7O95391 586 aaKnown RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 CYP2D6P10635 497 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 CUL4BQ13620 913 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 PFKFB3Q16875 520 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 FAM47AQ5JRC9 791 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 SMAP1Q8IYB5 467 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 OR13H1Q8NG92 308 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 DHX58Q96C10 678 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 ABHD17AQ96GS6 310 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
CLCN3-202ENST00000360642 FAN1Q9Y2M0 1017 aa8.23□□□□□ -1.09
CLCN3-202ENST00000360642 CCDC88AQ3V6T2 1871 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 A0A1B0GTH6 734 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 NFKBIEO00221 500 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 GIPC1O14908 333 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ARHGAP6O43182 974 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SCG2P13521 617 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 TRAPPC10P48553 1259 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 NT5C2P49902 561 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
CLCN3-202ENST00000360642 GOLGA8FQ08AF8 430 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 GOLGA8DPQ0D2H9 430 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ZNF174Q15697 407 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 VPS72Q15906 364 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 KIAA0319Q5VV43 1072 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SPECC1LQ69YQ0 1117 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 TC2NQ8N9U0 490 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 CTCFLQ8NI51 663 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ANKS1AQ92625 1134 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 GSDMAQ96QA5 445 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 PHLPP2Q6ZVD8 1323 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ADAMTS3O15072 1205 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 FANCGO15287 622 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 VEGFAP15692 232 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-202ENST00000360642 EPB42P16452 691 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 MAP1SQ66K74 1059 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-202ENST00000360642 AMIGO3Q86WK7 504 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 IL17RBQ9NRM6 502 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 A0A096LPE4 126 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 STX10O60499 249 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 DNAJA2O60884 412 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 CLSTN1O94985 981 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 LMNB1P20700 586 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 L1CAMP32004 1257 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 MASP1P48740 699 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 IL17AQ16552 155 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SLC4A8Q2Y0W8 1093 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 PLEKHG4Q58EX7 1191 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 HSP90AA4PQ58FG1 418 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 C12orf60Q5U649 245 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SPATA1Q5VX52 437 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 CCDC34Q96HJ3 373 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SGSM3Q96HU1 749 aa8.22□□□□□ -1.09
CLCN3-202ENST00000360642 SMAD5Q99717 465 aaKnown RBP8.22□□□□□ -1.09
CLCN3-202ENST00000360642 ROBO3Q96MS0 1386 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 POLR2BP30876 1174 aaKnown RBP8.21□□□□□ -1.09
CLCN3-202ENST00000360642 CBX1P83916 185 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 CDKAL1Q5VV42 579 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 SPTY2D1Q68D10 685 aaPredicted RBP8.21□□□□□ -1.09
CLCN3-202ENST00000360642 DGKHQ86XP1 1220 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 C4orf32Q8N8J7 132 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 BAG1Q99933 345 aaPredicted RBP8.21□□□□□ -1.09
CLCN3-202ENST00000360642 JAG2Q9Y219 1238 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 PCDHB14Q9Y5E9 798 aa8.21□□□□□ -1.09
CLCN3-202ENST00000360642 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.1
CLCN3-202ENST00000360642 BTAF1O14981 1849 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 VWA3AA6NCI4 1184 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 ZBTB42B2RXF5 422 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 PBX1P40424 430 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 AFMP43652 599 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 CEP120Q8N960 986 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 SH3GLB2Q9NR46 395 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 SBF2Q86WG5 1849 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 XDHP47989 1333 aa8.21□□□□□ -1.1
CLCN3-202ENST00000360642 FAM221AA4D161 298 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 TSPY2A6NKD2 308 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ZSCAN12O43309 604 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 GDF9O60383 454 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 CASP1P29466 404 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 NLRP5P59047 1200 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ARL6IP4Q66PJ3 421 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PIK3AP1Q6ZUJ8 805 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 POP1Q99575 1024 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 TCP11L1Q9NUJ3 509 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 MCM9Q9NXL9 1143 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 OGFRQ9NZT2 677 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PPP2R2CQ9Y2T4 447 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 NHSQ6T4R5 1651 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ZSCAN20P17040 1043 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 KIF5BP33176 963 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ADKP55263 362 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 TFAP4Q01664 338 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms