RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ECM1Q16610 540 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 SHCBP1Q8NEM2 672 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 PDCD2LQ9BRP1 358 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM53CQ9NYF3 392 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 RSPH14Q9UHP6 348 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 PLXNB2O15031 1838 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 DOCK3Q8IZD9 2030 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 TEX33O43247 280 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 CCP110O43303 1012 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 ZNF76P36508 570 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 COPB1P53618 953 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 KCNK18Q7Z418 384 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 DDX12PQ92771 950 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 CARD6Q9BX69 1037 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 COPB2P35606 906 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 TRIM65Q6PJ69 517 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 SAMD3Q8N6K7 520 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 TRIM47Q96LD4 638 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 FHOD1Q9Y613 1164 aa15.34■□□□□ 0.05
CSNK1E-201ENST00000359867 SOWAHBA6NEL2 793 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 N4BP3O15049 544 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 TRPA1O75762 1119 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 MRPS9P82933 396 aaKnown RBP15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 EHHADHQ08426 723 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 FOXR2Q6PJQ5 311 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 IRF2BP1Q8IU81 584 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM133AQ8N9E0 248 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 TC2NQ8N9U0 490 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 MNS1Q8NEH6 495 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 IVNS1ABPQ9Y6Y0 642 aa15.33■□□□□ 0.05
CSNK1E-201ENST00000359867 FRMPD4Q14CM0 1322 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 TRIM49BA6NDI0 452 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 MSH4O15457 936 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 STX10O60499 249 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 COBLO75128 1261 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 RPA1P27694 616 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 ADORA2AP29274 412 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 PMS1P54277 932 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 PPFIBP1Q86W92 1011 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 FAM114A1Q8IWE2 563 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 REXO1L1PQ8IX06 675 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 CNPY4Q8N129 248 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 GUF1Q8N442 669 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 KIAA0895Q8NCT3 520 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 UBXN4Q92575 508 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 DUSP9Q99956 384 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 MAGEC2Q9UBF1 373 aaPredicted RBP15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 KIAA1024Q9UPX6 916 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 ZSWIM8A7E2V4 1837 aa15.33■□□□□ 0.04
CSNK1E-201ENST00000359867 IGLV3-22A0A075B6J6 115 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 AKR1B15C9JRZ8 316 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 ARHGAP6O43182 974 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 NOP2P46087 812 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 CENPPQ6IPU0 288 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 DYMQ7RTS9 669 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 DNAJC19Q96DA6 116 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 PANX2Q96RD6 677 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 TUBB4AP04350 444 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 NR3C2P08235 984 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 PLA2G4BP0C869 781 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 PNMA6AP0CW24 399 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 ITGB5P18084 799 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 ALDH5A1P51649 535 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 TRIM14Q14142 442 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 BMS1Q14692 1282 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 PCNX4Q63HM2 1172 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 TMEM139Q8IV31 216 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 CSGALNACT2Q8N6G5 542 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 FGD4Q96M96 766 aa15.32■□□□□ 0.04
CSNK1E-201ENST00000359867 DNAJC25-GNG10A0A024R161 153 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 MED24O75448 989 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 MAPK4P31152 587 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 MAP2K2P36507 400 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 ADKP55263 362 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 CEP55Q53EZ4 464 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 ANKRD40Q6AI12 368 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 BAG1Q99933 345 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 WDR11Q9BZH6 1224 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 ARHGAP39Q9C0H5 1083 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 SLC39A2Q9NP94 309 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 TAB2Q9NYJ8 693 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 PKD2L1Q9P0L9 805 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 VAV3Q9UKW4 847 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 MCM3APO60318 1980 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 POTEB3A0JP26 581 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 TPM1P09493 284 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 CTGFP29279 349 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 GYS2P54840 703 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms