RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 IGSF9BQ9UPX0 1349 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 A0A087X0B3 334 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 SGPL1O95470 568 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 XRCC6P12956 609 aaKnown RBP eCLIP13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 PFKFB1P16118 471 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 SLC26A2P50443 739 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KCNA10Q16322 511 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 TMEM119Q4V9L6 283 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 PDXDC2PQ6P474 469 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KAT2BQ92831 832 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 GLG1Q92896 1179 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 GOLPH3LQ9H4A5 285 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
NIF3L1-201ENST00000359683 H3BRB1 525 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 NDUFA8P51970 172 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 PURAQ00577 322 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 TRIM50Q86XT4 487 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 ENGASEQ8NFI3 743 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 NACC1Q96RE7 527 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 TUT1Q9H6E5 874 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 ERAP1Q9NZ08 941 aa13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-201ENST00000359683 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 HAS3O00219 553 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 F2P00734 622 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 ASGR1P07306 291 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 MYL3P08590 195 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 ZNF286BP0CG31 522 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 CAPN2P17655 700 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 PLCG1P19174 1290 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 GJA8P48165 433 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 PSMC6P62333 389 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 RRAGBQ5VZM2 374 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 CCDC73Q6ZRK6 1079 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 PLIN2Q99541 437 aa13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 PYM1Q9BRP8 204 aaKnown RBP13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 MTG1Q9BT17 334 aaPredicted RBP13.87□□□□□ -0.19
NIF3L1-201ENST00000359683 MOXD2PA6NHM9 499 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ZBTB39O15060 712 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 POLR2DO15514 142 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 LIG1P18858 919 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 SYKP43405 635 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PRKCEQ02156 737 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 SNW1Q13573 536 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PLCB4Q15147 1175 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 E2F4Q16254 413 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 NAALADL2Q58DX5 795 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 KCNK18Q7Z418 384 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PDILTQ8N807 584 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 RASSF8Q8NHQ8 419 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ANKEF1Q9NU02 776 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 BLOC1S4Q9NUP1 217 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ZNF215Q9UL58 517 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 DNM3Q9UQ16 869 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 CEP290O15078 2479 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 A0A087WWV3 80 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 DNM1LO00429 736 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 CABYRO75952 493 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 OATP04181 439 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PSEN2P49810 448 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ACLYP53396 1101 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 FAM160A1Q05DH4 1040 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ANO5Q75V66 913 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 OTUD6AQ7L8S5 288 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 ATP8B4Q8TF62 1192 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 FAM167AQ96KS9 214 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 PHF24Q9UPV7 400 aa13.86□□□□□ -0.19
NIF3L1-201ENST00000359683 E9PMD0 336 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms