RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
TMC3-201ENST00000359440 TRIM6Q9C030 488 aaPredicted RBP12.2□□□□□ -0.46
TMC3-201ENST00000359440 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
TMC3-201ENST00000359440 AGTP01019 485 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 NR3C1P04150 777 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 CD19P15391 556 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 LIG4P49917 911 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 GPC5P78333 572 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 SPARCL1Q14515 664 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 MIPOL1Q8TD10 442 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 FAM129AQ9BZQ8 928 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 FAM107AO95990 144 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 ATF7P17544 494 aaPredicted RBP12.2□□□□□ -0.46
TMC3-201ENST00000359440 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 LSP1P33241 339 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMC3-201ENST00000359440 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 TBC1D9BQ66K14 1250 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 TBC1D1Q86TI0 1168 aaPredicted RBP12.2□□□□□ -0.46
TMC3-201ENST00000359440 CFAP61Q8NHU2 1237 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 DNAJC12Q9UKB3 198 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 INHBAP08476 426 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 DYNLL2Q96FJ2 89 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 PNKPQ96T60 521 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
TMC3-201ENST00000359440 EXOC1LA0A1B0GW35 172 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 STAM2O75886 525 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 SEPT6Q14141 434 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 GNPTABQ3T906 1256 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 FAM102BQ5T8I3 360 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 TRIM4Q9C037 500 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 UBE2TQ9NPD8 197 aaPredicted RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 PDXKO00764 312 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 ZBTB5O15062 677 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 SLC16A3O15427 465 aaKnown RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 NCK2O43639 380 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 RNF8O76064 485 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 KDM7AQ6ZMT4 941 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 CNPY4Q8N129 248 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 PITPNM3Q9BZ71 974 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 SCINQ9Y6U3 715 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 TNS3Q68CZ2 1445 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 DIP2BQ9P265 1576 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 POC1B-GALNT4F8VUJ3 575 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 CLIC2O15247 247 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 SMIM24O75264 130 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 USP11P51784 963 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 PPP2R5AQ15172 486 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 MAP7D3Q8IWC1 876 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
TMC3-201ENST00000359440 ANGPTL2Q9UKU9 493 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
TMC3-201ENST00000359440 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
TMC3-201ENST00000359440 CCDC127Q96BQ5 260 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 ISCUQ9H1K1 167 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 INTUQ9ULD6 942 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 SETD1BQ9UPS6 1966 aaKnown RBP12.18□□□□□ -0.46
TMC3-201ENST00000359440 ESYT3A0FGR9 886 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 LRRN2O75325 713 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 SARSP49591 514 aaKnown RBP12.18□□□□□ -0.46
TMC3-201ENST00000359440 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
TMC3-201ENST00000359440 DAGLBQ8NCG7 672 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 ZNF577Q9BSK1 485 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 AGPAT5Q9NUQ2 364 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 STOML1Q9UBI4 398 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 SERPINA10Q9UK55 444 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 MINPP1Q9UNW1 487 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 HARSP12081 509 aaKnown RBP12.18□□□□□ -0.46
TMC3-201ENST00000359440 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 TMED2Q15363 201 aa12.18□□□□□ -0.46
TMC3-201ENST00000359440 NAB2Q15742 525 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms