RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 BCRP11274 1271 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 ARHGEF16Q5VV41 709 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 KCTD16Q68DU8 428 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 TRAPPC11Q7Z392 1133 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
SSU72-202ENST00000359060 AMFRQ9UKV5 643 aa12.22□□□□□ -0.45
SSU72-202ENST00000359060 REXO2Q9Y3B8 237 aaKnown RBP12.22□□□□□ -0.45
SSU72-202ENST00000359060 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 SMIM23A6NLE4 172 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 IVLP07476 585 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 GJC1P36383 396 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 PRELPP51888 382 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 MYL7Q01449 175 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 LLGL1Q15334 1064 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 CEP55Q53EZ4 464 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 TTC19Q6DKK2 380 aaPredicted RBP12.21□□□□□ -0.45
SSU72-202ENST00000359060 NLRX1Q86UT6 975 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 EHD4Q9H223 541 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 GOLPH3Q9H4A6 298 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 PICK1Q9NRD5 415 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 BZW2Q9Y6E2 419 aaKnown RBP12.21□□□□□ -0.45
SSU72-202ENST00000359060 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 TLDC2A0PJX2 215 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 FANCGO15287 622 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 ENTPD3O75355 529 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 EYA4O95677 639 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 ASNSP08243 561 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 DACT2Q5SW24 774 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
SSU72-202ENST00000359060 DNAAF5Q86Y56 855 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 C10orf67Q8IYJ2 551 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 LRRC15Q8TF66 581 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.45
SSU72-202ENST00000359060 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
SSU72-202ENST00000359060 RAVER2Q9HCJ3 691 aaKnown RBP12.21□□□□□ -0.45
SSU72-202ENST00000359060 NHSL1Q5SYE7 1610 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 FAM86B1E9PN63 330 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 SPOPO43791 374 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 FAM86B2P0C5J1 330 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.46
SSU72-202ENST00000359060 LXNQ9BS40 222 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.46
SSU72-202ENST00000359060 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.46
SSU72-202ENST00000359060 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 BIRC3Q13489 604 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 DPH5Q9H2P9 285 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 DLATP10515 647 aaKnown RBP12.2□□□□□ -0.46
SSU72-202ENST00000359060 FERP16591 822 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 KLRC1P26715 233 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 CASP4P49662 377 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 USP37Q86T82 979 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 FAM160B2Q86V87 743 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 ZNF70Q9UC06 446 aaPredicted RBP12.2□□□□□ -0.46
SSU72-202ENST00000359060 NFU1Q9UMS0 254 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 A0A087X0T9 212 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 FAM228BP0C875 321 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 UCHL3P15374 230 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 HOXA7P31268 230 aaPredicted RBP12.2□□□□□ -0.46
SSU72-202ENST00000359060 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
SSU72-202ENST00000359060 STIM2Q9P246 746 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 DNAJC12Q9UKB3 198 aa12.2□□□□□ -0.46
SSU72-202ENST00000359060 SNED1Q8TER0 1413 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SSU72P8A0A1W2PR75 194 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 PDXKO00764 312 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SLC18A3Q16572 532 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 GJB7Q6PEY0 223 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 MCF2L2Q86YR7 1114 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SYCE1Q8N0S2 351 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 DNAJC19Q96DA6 116 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 C4BP0C0L5 1744 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 CHD4Q14839 1912 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 TBX3O15119 743 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 ZRANB2O95218 330 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSU72-202ENST00000359060 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
SSU72-202ENST00000359060 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 GIT2Q14161 759 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 MEA1Q16626 185 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 CCDC25Q86WR0 208 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
SSU72-202ENST00000359060 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 FGFBP2Q9BYJ0 223 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 UBE2TQ9NPD8 197 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms