RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PAK2Q13177 524 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TMEM179Q6ZVK1 233 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 ZNF571Q7Z3V5 609 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 IFT81Q8WYA0 676 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TAF4BQ92750 862 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 KRT12Q99456 494 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SH3GL2Q99962 352 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 BHMT2Q9H2M3 363 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 EPB41L5Q9HCM4 733 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 FAM198AQ9UFP1 575 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 NFU1Q9UMS0 254 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 ASTN1O14525 1302 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SHOX2O60902 331 aaPredicted RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 NR3C1P04150 777 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 EPB41P11171 864 aaKnown RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 PON1P27169 355 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 SYDE2Q5VT97 1194 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 ALS2CLQ60I27 953 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 SIAH1Q8IUQ4 282 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 RUSC1Q9BVN2 902 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 GOLPH3Q9H4A6 298 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 GDF3Q9NR23 364 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 GCNT4Q9P109 453 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 PDXKO00764 312 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 KCNK3O14649 394 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 MSH4O15457 936 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 FOSP01100 380 aaPredicted RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 ZNF76P36508 570 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 NOP2P46087 812 aaKnown RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 NNTQ13423 1086 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 SKIDA1Q1XH10 827 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 DNAJC21Q5F1R6 531 aaKnown RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 IRF2BP2Q7Z5L9 587 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 FAM20AQ96MK3 541 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 POLD4Q9HCU8 107 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 VAV3Q9UKW4 847 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 BZW2Q9Y6E2 419 aaKnown RBP9.41□□□□□ -0.9
RFX3-202ENST00000358730 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 AFF2P51816 1311 aa9.41□□□□□ -0.9
RFX3-202ENST00000358730 FAM153BP0C7A2 387 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 CASP4P49662 377 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 TNNC1P63316 161 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 RPS6KA1Q15418 735 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 PTPROQ16827 1216 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 FAM153CQ494X1 144 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 C10orf76Q5T2E6 689 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 GMCL1P1Q8NEA9 526 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 CYP2W1Q8TAV3 490 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 RBM46Q8TBY0 533 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 CCDC43Q96MW1 224 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 ZIM3Q96PE6 472 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 FAM153AQ9UHL3 310 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 SMCHD1A6NHR9 2005 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 BTNL10A8MVZ5 291 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 CLIC2O15247 247 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 SLC16A3O15427 465 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 FLOT1O75955 427 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 TRIM37O94972 964 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 RPL13P26373 211 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 GUCY2FP51841 1108 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 KCNA1Q09470 495 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 EPHA7Q15375 998 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 IFI16Q16666 785 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 BMT2Q1RMZ1 405 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 TTMPQ5BVD1 217 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 DPY19L2P1Q6NXN4 242 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 TATDN1Q6P1N9 297 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 ALKBH5Q6P6C2 394 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 GBP6Q6ZN66 633 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 KLHL7Q8IXQ5 586 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 USP38Q8NB14 1042 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 ARL8AQ96BM9 186 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 EIF2AK1Q9BQI3 630 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 IDI2Q9BXS1 227 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 CAPS2Q9BXY5 557 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 METTL14Q9HCE5 456 aaKnown RBP9.4□□□□□ -0.9
RFX3-202ENST00000358730 RGL1Q9NZL6 768 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 NAGPAQ9UK23 515 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
RFX3-202ENST00000358730 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.91
RFX3-202ENST00000358730 OPLAHO14841 1288 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 RAD51CO43502 376 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 KIF4AO95239 1232 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 KRT14P02533 472 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 BMP3P12645 472 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SPICE1Q8N0Z3 855 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms