RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GCNT4Q9P109 453 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 RASA4BC9J798 803 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 RASA4O43374 803 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 METTL14Q9HCE5 456 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DDX28Q9NUL7 540 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 TRPC5Q9UL62 973 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ELF3P78545 371 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 CEP55Q53EZ4 464 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 BLIDQ8IZY5 108 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 SAYSD1Q9NPB0 183 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PCDHB6Q9Y5E3 794 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MROH7-TTC4A0A0A0MT08 1334 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ARHGEF35A5YM69 484 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 M0R2C6 588 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 HSPA8P11142 646 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MAP3K7CLP57077 242 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PRMT1Q99873 361 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 CEP72Q9P209 647 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 C2CD2Q9Y426 696 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 KRT8P05787 483 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 CAV1Q03135 178 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MESDQ14696 234 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 TRIM65Q6PJ69 517 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ENAHQ8N8S7 591 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DDHD1Q8NEL9 900 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GRAMD1AQ96CP6 724 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 EEF2KMTQ96G04 330 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MYH13Q9UKX3 1938 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GCKRQ14397 625 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 RPS6KA2Q15349 733 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 FSCBQ5H9T9 825 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 LRRC34Q8IZ02 419 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 TTC25Q96NG3 672 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ABCA4P78363 2273 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 XPO1O14980 1071 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PRDM1O75626 825 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MED21Q13503 144 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DNAL1Q4LDG9 190 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 AFPP02771 609 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PRR29P0C7W0 189 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 EGFL6Q8IUX8 553 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DTX3LQ8TDB6 740 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MRPL40Q9NQ50 206 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PANK4Q9NVE7 773 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GGT7Q9UJ14 662 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DAPK3O43293 454 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 PUM3Q15397 648 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 FAM129AQ9BZQ8 928 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 SMARCAL1Q9NZC9 954 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ARIH1Q9Y4X5 557 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 APOA1P02647 267 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 RAP1GDS1P52306 607 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 REXO1L1PQ8IX06 675 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 DYTNA2CJ06 578 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 TRIP10Q15642 601 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 RABGAP1LQ5R372 815 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 PLEKHF1Q96S99 279 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 COQ7Q99807 217 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 FOXN1O15353 648 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 CCDC15Q0P6D6 951 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 NSL1Q96IY1 281 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 LRCH1Q9Y2L9 728 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 PCM1Q15154 2024 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 REREQ9P2R6 1566 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 TTC26A0AVF1 554 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 GCNT3O95395 438 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 CYP21A2P08686 494 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 JDP2Q8WYK2 163 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 NDST4Q9H3R1 872 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 YTHDF3Q7Z739 585 aaKnown RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF579Q8NAF0 562 aaKnown RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 FGFR4P22455 802 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 HDAC4P56524 1084 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 INAQ16352 499 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 PTPREP23469 700 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 TSPY1Q01534 308 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 KAZNQ674X7 775 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 MDM1Q8TC05 714 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 TRIM51Q9BSJ1 452 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 IRX2Q9BZI1 471 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 GIMAP4Q9NUV9 329 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 STK17AQ9UEE5 414 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 IQANK1A0A1B0GTG1 560 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 LRRC53A6NM62 1247 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 PYGBP11216 843 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 TBL3Q12788 808 aaKnown RBP6.51□□□□□ -1.37
VPS13B-203ENST00000358544 RNF217Q8TC41 542 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 ANKFY1Q9P2R3 1169 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 PCDHB13Q9Y5F0 798 aa6.51□□□□□ -1.37
VPS13B-203ENST00000358544 KDM5AP29375 1690 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms