RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ESYT3A0FGR9 886 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 ZSCAN5CA6NGD5 496 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 LIN7AO14910 233 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 HPDP32754 393 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 GPR162Q16538 588 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 LRRC15Q8TF66 581 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 PSMB7Q99436 277 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 TTC7AQ9ULT0 858 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 PGRMC1O00264 195 aaKnown RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 BUB1O43683 1085 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 KIF4AO95239 1232 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 PDHBP11177 359 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 EHHADHQ08426 723 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 HLTFQ14527 1009 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 GRM4Q14833 912 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 QPCTQ16769 361 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 CEP57Q86XR8 500 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 SDR42E1Q8WUS8 393 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 CALML4Q96GE6 196 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 XPO6Q96QU8 1125 aaKnown RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 A0A0A6YYK5 440 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 PP2D1A8MPX8 630 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 UFL1O94874 794 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 ALADP13716 330 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 CLUL1Q15846 466 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 SV2BQ7L1I2 683 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 TMC3Q7Z5M5 1100 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 TXLNGYQ9BZA5 131 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 NOD2Q9HC29 1040 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 SBF1O95248 1867 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 IRS2Q9Y4H2 1338 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 NFKBIEO00221 500 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 PPFIA2O75334 1257 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 NUDT17P0C025 328 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 FCER1AP12319 257 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 KLRC1P26715 233 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 PIGWQ7Z7B1 504 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 CPLX4Q7Z7G2 160 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 LMBR1Q8WVP7 490 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 PGM2Q96G03 612 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 BARHL2Q9NY43 387 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 INTUQ9ULD6 942 aa11.63□□□□□ -0.55
CAPN3-205ENST00000357568 DIS3Q9Y2L1 958 aaKnown RBP11.63□□□□□ -0.55
CAPN3-205ENST00000357568 F8VZ95 297 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 TLR2O60603 784 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 NPEPPSP55786 919 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 GRIK3Q13003 919 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ARPP21Q9UBL0 812 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 FBXL5Q9UKA1 691 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 SLC26A4O43511 780 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 NOL4O94818 638 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 FTCDO95954 541 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 GBP2P32456 591 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ZCWPW2Q504Y3 356 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 SLFN11Q7Z7L1 901 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 ZC3H3Q8IXZ2 948 aaKnown RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 LRRC57Q8N9N7 239 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 HOMER3Q9NSC5 361 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 CNOT8Q9UFF9 292 aaKnown RBP11.62□□□□□ -0.55
CAPN3-205ENST00000357568 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
CAPN3-205ENST00000357568 F8W031 263 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 STXBP3O00186 592 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 FKBP3Q00688 224 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 SPRED3Q2MJR0 410 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 ODF2Q5BJF6 829 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 SYCE1Q8N0S2 351 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 CCDC63Q8NA47 563 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 TMEM109Q9BVC6 243 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 NSRP1Q9H0G5 558 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms