RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SH2D3CQ8N5H7 860 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SUGCTQ9HAC7 445 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 KMT5AQ9NQR1 393 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 KLC4Q9NSK0 619 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 DCTN3O75935 186 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 NR3C1P04150 777 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 CCDC93Q567U6 631 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 AXIN2Q9Y2T1 843 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 E9PMD0 336 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 FCER1AP12319 257 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 BASP1P80723 227 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 DPYDQ12882 1025 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 SFR1Q86XK3 245 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 GOLGA8SH3BPF8 625 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 EIF3HO15372 352 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 AP5Z1O43299 807 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 ASPHQ12797 758 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 DNAJC24Q6P3W2 148 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 ATP6V0A1Q93050 837 aa16.81■□□□□ 0.28
TRAPPC11-202ENST00000357207 CDHR2Q9BYE9 1310 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 SRGNP10124 158 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 ORC2Q13416 577 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 CENPUQ71F23 418 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 MAP3K7O43318 606 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 GYPCP04921 128 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 SRRM1Q8IYB3 904 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 RASA4BC9J798 803 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 RASA4O43374 803 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 ATP5HO75947 161 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 MDH1P40925 334 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 IRAK1P51617 712 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 GPC5P78333 572 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 ZNF211Q13398 564 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 PYROXD1Q8WU10 500 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 TRIM10Q9UDY6 481 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 HPCAL4Q9UM19 191 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 MCF2LO15068 1137 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 DYNLT1P63172 113 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 CCT8L2Q96SF2 557 aa16.8■□□□□ 0.28
TRAPPC11-202ENST00000357207 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 MROH7-TTC4A0A0A0MT08 1334 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 H0Y3Z8 333 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 ANTXR2P58335 489 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 PDE1CQ14123 709 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 NLRP7Q8WX94 980 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 IFT122Q9HBG6 1241 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 AMACRQ9UHK6 382 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 FAF1Q9UNN5 650 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 NOC2LQ9Y3T9 749 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 FAM187AA6NFU0 413 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 GPC4O75487 556 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 ZRANB2O95218 330 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 BRAFP15056 766 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 KCNB2Q92953 911 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 SCYL1Q96KG9 808 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 EPN3Q9H201 632 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 TMEM94Q12767 1356 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 MLXIPLQ9NP71 852 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 PNPLA7Q6ZV29 1317 aa16.79■□□□□ 0.28
TRAPPC11-202ENST00000357207 CHRNA3P32297 505 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 KNOP1Q1ED39 458 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 PDZD4Q76G19 769 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 CALN1Q9BXU9 219 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 FHOD1Q9Y613 1164 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms