RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RAD51AP2Q09MP3 1159 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 RINT1Q6NUQ1 792 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 APBA2Q99767 749 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 DBR1Q9UK59 544 aaKnown RBP20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 IGSF9BQ9UPX0 1349 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 PCNTO95613 3336 aa20.2■□□□□ 0.82
SMARCD3-202ENST00000356800 BECN2A8MW95 431 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 PPP1R3GB7ZBB8 358 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 GOLGA6L19H0YKK7 550 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ADCYAP1R1P41586 468 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 GIT2Q14161 759 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 HSDL1Q3SXM5 330 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 GJC2Q5T442 439 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 C1orf186Q6ZWK4 172 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 HPS3Q969F9 1004 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 PPP1R9BQ96SB3 815 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 PCYT2Q99447 389 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 BMP2KQ9NSY1 1161 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 EXOC1Q9NV70 894 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 IKBKBO14920 756 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 IDEP14735 1019 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 YWHABP31946 246 aaKnown RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 MYH11P35749 1972 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ARHGAP1Q07960 439 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 OLFML2BQ68BL8 750 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ANO5Q75V66 913 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 DHX37Q8IY37 1157 aaKnown RBP20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 AOPEPQ8N6M6 819 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 ATP6V0A1Q93050 837 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 PDLIM2Q96JY6 352 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 MED15Q96RN5 788 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 GPR20Q99678 358 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 REEP2Q9BRK0 252 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 GABRQQ9UN88 632 aa20.19■□□□□ 0.82
SMARCD3-202ENST00000356800 FRMD3A2A2Y4 597 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 BACH1O14867 736 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 ATP4AP20648 1035 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 RARRES1P49788 294 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 SP3Q02447 781 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 STK4Q13043 487 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 COASYQ13057 564 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 PRAMEF19Q5SWL8 479 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 PANK4Q9NVE7 773 aa20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 ZHX1Q9UKY1 873 aaPredicted RBP20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 MAFBQ9Y5Q3 323 aaPredicted RBP20.18■□□□□ 0.82
SMARCD3-202ENST00000356800 ARHGEF35A5YM69 484 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 KRT18P05783 430 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 CYP2C19P33261 490 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 TCF7P36402 384 aaPredicted RBP20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 PRKCEQ02156 737 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 NCAPHQ15003 741 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 PLA2G4FQ68DD2 849 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 KIAA0895Q8NCT3 520 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 CCDC47Q96A33 483 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 SPATA33Q96N06 139 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 SH2D3AQ9BRG2 576 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 ZNF302Q9NR11 478 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 ANKEF1Q9NU02 776 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 CASP8AP2Q9UKL3 1982 aa20.17■□□□□ 0.82
SMARCD3-202ENST00000356800 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 ADCY6O43306 1168 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 SMPD1P17405 629 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 ERCC5P28715 1186 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 PRCPP42785 496 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 NPEPPSP55786 919 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 CCDC144BQ3MJ40 725 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 PADI6Q6TGC4 694 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 MAPK8IP1Q9UQF2 711 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 DKC1O60832 514 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 ZNF865P0CJ78 1059 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 MYL5Q02045 173 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 CCDC65Q8IXS2 484 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 SLC39A2Q9NP94 309 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 KCND2Q9NZV8 630 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 PCDHA2Q9Y5H9 948 aa20.16■□□□□ 0.82
SMARCD3-202ENST00000356800 LGR5O75473 907 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 GH1P01241 217 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 XRCC5P13010 732 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 FLT3LGP49771 235 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 IRF5Q13568 498 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 DUSP28Q4G0W2 176 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 IQSEC1Q6DN90 963 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 KLHL10Q6JEL2 608 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 TRMT44Q8IYL2 757 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 ADSSL1Q8N142 457 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 GLIS3Q8NEA6 775 aa20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 AFAP1L1Q8TED9 768 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms