RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 SQORQ9Y6N5 450 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 REC8O95072 547 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 RB1P06400 928 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 PSMA5P28066 241 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 MGAT3Q09327 533 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 TMEM62Q0P6H9 643 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 BRF1Q92994 677 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 PCYT2Q99447 389 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 UBE2ZQ9H832 354 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-204ENST00000356316 TBC1D22BQ9NU19 505 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
CAPN3-204ENST00000356316 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 SMIM35A0A1B0GVV1 85 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 HBP1O60381 514 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ATG7O95352 703 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 CPA1P15085 419 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 COL9A1P20849 921 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 KCNA5P22460 613 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 KLRC1P26715 233 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 CD52P31358 61 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 HSPA4P34932 840 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 CTNNB1P35222 781 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 KRT76Q01546 638 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 PAK2Q13177 524 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 TRAPPC12Q8WVT3 735 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 CELF4Q9BZC1 486 aaKnown RBP12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
CAPN3-204ENST00000356316 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 NCK2O43639 380 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 CYP3A4P08684 503 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 BMPR1AP36894 532 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-204ENST00000356316 NFX1Q12986 1120 aaKnown RBP12.1□□□□□ -0.47
CAPN3-204ENST00000356316 LEXMQ3ZCV2 418 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 ZNF484Q5JVG2 852 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 ABHD15Q6UXT9 468 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-204ENST00000356316 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
CAPN3-204ENST00000356316 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
CAPN3-204ENST00000356316 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 FAM50BQ9Y247 325 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
CAPN3-204ENST00000356316 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 DGKIO75912 1065 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 CCNE2O96020 404 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 PSAPP07602 524 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-204ENST00000356316 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
CAPN3-204ENST00000356316 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-204ENST00000356316 TRIM22Q8IYM9 498 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 KCNB2Q92953 911 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 PHKBQ93100 1093 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 CEP131Q9UPN4 1083 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms