RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 HSPA1AP0DMV8 641 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 HSPA1BP0DMV9 641 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 PPP3CCP48454 512 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 INTS4Q96HW7 963 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 SUCLG2Q96I99 432 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ADA2Q9NZK5 511 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 LMNAP02545 664 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ESRRAP11474 423 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 TTC17Q96AE7 1141 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.557e-10■■□□□ 13.1
COL27A1-201ENST00000356083 LUC7L3O95232 432 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 CC2D1AQ6P1N0 951 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 SIK2Q9H0K1 926 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 HOXA13P31271 388 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 HOXC9P31274 260 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 SYMPKQ92797 1274 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ACCSQ96QU6 501 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 KRT14P02533 472 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL27A1-201ENST00000356083 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
COL27A1-201ENST00000356083 NPATQ14207 1427 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 CRLF3Q8IUI8 442 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 CCDC197Q8NCU1 140 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 AIPL1Q9NZN9 384 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 GRIN1Q05586 938 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 C2orf54Q08AI8 447 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 GTPBP6O43824 516 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-201ENST00000356083 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 CLCN1P35523 988 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 PAPOLAP51003 745 aaKnown RBP18.48■□□□□ 0.55
COL27A1-201ENST00000356083 PDXDC1Q6P996 788 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 SP110Q9HB58 689 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 SPDYE5A6NIY4 337 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 NBNO60934 754 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 SPDYE7PQ495Y7 208 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 COBLL1Q53SF7 1204 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 CNKSR1Q969H4 720 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 COA7Q96BR5 231 aa18.48■□□□□ 0.55
COL27A1-201ENST00000356083 TTLL1O95922 423 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 TSPY1Q01534 308 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 KRT17Q04695 432 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 MRPL47Q9HD33 250 aaKnown RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 FAM26FQ5R3K3 315 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 PKN3Q6P5Z2 889 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 FAM133AQ8N9E0 248 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 OTUB1Q96FW1 271 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 MAGEB10Q96LZ2 347 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 GSNP06396 782 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 EPB42P16452 691 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 LRRC31Q6UY01 552 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 RFX8Q6ZV50 586 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 ZNF341Q9BYN7 854 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 SCG2P13521 617 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 PDCLQ13371 301 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 DEPDC1Q5TB30 811 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 VPS39Q96JC1 886 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-201ENST00000356083 GNAT1P11488 350 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 NOSTRINQ8IVI9 506 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 MFN1Q8IWA4 741 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
COL27A1-201ENST00000356083 NSD2O96028 1365 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 SLC8A1P32418 973 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 CUL1Q13616 776 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 MORF4L2Q15014 288 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 OR6P1Q8NGX9 317 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 SLC13A1Q9BZW2 595 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 MAP3K15Q6ZN16 1313 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 MOCS2O96007 188 aaPredicted RBP18.46■□□□□ 0.55
COL27A1-201ENST00000356083 PSMC5P62195 406 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 MEI1Q5TIA1 1274 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 RAB42Q8N4Z0 105 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 CENPKQ9BS16 269 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 FLT4P35916 1363 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 DFFAO00273 331 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 DDIASQ8IXT1 998 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 DYDC2Q96IM9 177 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
COL27A1-201ENST00000356083 AMNQ9BXJ7 453 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 PCDHGB4Q9UN71 923 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 ASXL1Q8IXJ9 1541 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 RLBP1P12271 317 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 EIF2AK2P19525 551 aaKnown RBP18.46■□□□□ 0.55
COL27A1-201ENST00000356083 PEX3P56589 373 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 SPATS2Q86XZ4 545 aaKnown RBP18.46■□□□□ 0.55
COL27A1-201ENST00000356083 STX19Q8N4C7 294 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 SNX21Q969T3 373 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 COPRSQ9NQ92 184 aa18.46■□□□□ 0.55
COL27A1-201ENST00000356083 SOX11P35716 441 aa18.46■□□□□ 0.54
COL27A1-201ENST00000356083 MSTO1Q9BUK6 570 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms