RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 FAM133BQ5BKY9 247 aaKnown RBP16.62■□□□□ 0.25
VAT1-201ENST00000355653 ANKS4BQ8N8V4 417 aa16.62■□□□□ 0.25
VAT1-201ENST00000355653 TPCN2Q8NHX9 752 aa16.62■□□□□ 0.25
VAT1-201ENST00000355653 SH3RF3Q8TEJ3 882 aaPredicted RBP16.62■□□□□ 0.25
VAT1-201ENST00000355653 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
VAT1-201ENST00000355653 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
VAT1-201ENST00000355653 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 CCT8L1PA6NM43 557 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 DNAJC8O75937 253 aaPredicted RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 SHBGP04278 402 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 TNNI2P48788 182 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.252e-9■■■□□ 16.5
VAT1-201ENST00000355653 TBC1D1Q86TI0 1168 aaPredicted RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 COA7Q96BR5 231 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 FMO2Q99518 471 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 ATP6V0A4Q9HBG4 840 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 BSDC1Q9NW68 430 aaPredicted RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 CCDC188H7C350 402 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 CLGNO14967 610 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 HERC4Q5GLZ8 1057 aaPredicted RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 ERMARDQ5T6L9 678 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 IRF2BP2Q7Z5L9 587 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 TEX11Q8IYF3 940 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 FAM129AQ9BZQ8 928 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 CNOT10Q9H9A5 744 aaKnown RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 SKAP2O75563 359 aaPredicted RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 FGGP02679 453 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 KCNQ4P56696 695 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 CCDC63Q8NA47 563 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 UHMK1Q8TAS1 419 aaKnown RBP16.61■□□□□ 0.25
VAT1-201ENST00000355653 MAGEC3Q8TD91 643 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 STAMBPL1Q96FJ0 436 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 LRRC27Q9C0I9 530 aa16.61■□□□□ 0.25
VAT1-201ENST00000355653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.253e-12■■□□□ 11.9
VAT1-201ENST00000355653 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
VAT1-201ENST00000355653 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 CUL5Q93034 780 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 THOC1Q96FV9 657 aaKnown RBP16.6■□□□□ 0.25
VAT1-201ENST00000355653 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 SLITRK6Q9H5Y7 841 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
VAT1-201ENST00000355653 GGT7Q9UJ14 662 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 NR2E1Q9Y466 385 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 KIAA1551Q9HCM1 1747 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 E9PMD0 336 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 GHRP10912 638 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 UCHL3P15374 230 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 IFNAR2P48551 515 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 P3H4Q92791 437 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
VAT1-201ENST00000355653 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 FAM114A2Q9NRY5 505 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 HDAC9Q9UKV0 1011 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 L3MBTL1Q9Y468 752 aa16.6■□□□□ 0.25
VAT1-201ENST00000355653 FRMPD2Q68DX3 1309 aaPredicted RBP16.6■□□□□ 0.25
VAT1-201ENST00000355653 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 GNA14O95837 355 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
VAT1-201ENST00000355653 CRYMQ14894 314 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 NBPF9Q3BBW0 867 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 RSRC1Q96IZ7 334 aaKnown RBP16.59■□□□□ 0.25
VAT1-201ENST00000355653 BTNL10A8MVZ5 291 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 FLOT1O75955 427 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
VAT1-201ENST00000355653 NR2F2P24468 414 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 TMEM119Q4V9L6 283 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 C10orf76Q5T2E6 689 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 HOOK3Q86VS8 718 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 LRRC34Q8IZ02 419 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 U2AF1L4Q8WU68 220 aaKnown RBP16.59■□□□□ 0.25
VAT1-201ENST00000355653 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 PRMT1Q99873 361 aaKnown RBP16.59■□□□□ 0.25
VAT1-201ENST00000355653 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
VAT1-201ENST00000355653 RASA1P20936 1047 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 RBM46Q8TBY0 533 aaKnown RBP16.58■□□□□ 0.25
VAT1-201ENST00000355653 NSMCE1Q8WV22 266 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 FAXDC2Q96IV6 333 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 AZI2Q9H6S1 392 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.25
VAT1-201ENST00000355653 CETN3O15182 167 aa16.58■□□□□ 0.24
VAT1-201ENST00000355653 H2AFZP0C0S5 128 aa16.58■□□□□ 0.24
VAT1-201ENST00000355653 SLCO1A2P46721 670 aa16.58■□□□□ 0.24
VAT1-201ENST00000355653 PLTPP55058 493 aa16.58■□□□□ 0.24
VAT1-201ENST00000355653 UBE2SQ16763 222 aa16.58■□□□□ 0.24
VAT1-201ENST00000355653 H2AFVQ71UI9 128 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms