RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 DNM3Q9UQ16 869 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 ZEB2O60315 1214 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 SPATA31C1P0DKV0 1188 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 SNHG28P0DPA3 235 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 USP8P40818 1118 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 PDIA5Q14554 519 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 ZSWIM2Q8NEG5 633 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 TRIM58Q8NG06 486 aa15.12■□□□□ 0.01
EBF3-201ENST00000355311 IGKV6D-41A0A0C4DH26 115 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 AGPSO00116 658 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CALCAP01258 141 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 MYL1P05976 194 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CLK2P49760 499 aaKnown RBP15.11■□□□□ 0.01
EBF3-201ENST00000355311 GIT2Q14161 759 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 HLTFQ14527 1009 aaKnown RBP eCLIP15.11■□□□□ 0.01
EBF3-201ENST00000355311 CCDC91Q7Z6B0 441 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 PHLDB2Q86SQ0 1253 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 DYDC2Q96IM9 177 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CD248Q9HCU0 757 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 SUFUQ9UMX1 484 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CAPN7Q9Y6W3 813 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CETN3O15182 167 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 CEP104O60308 925 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 PAFAH1B1P43034 410 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 IRAK1P51617 712 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 C8orf74Q6P047 294 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 ZNF571Q7Z3V5 609 aaPredicted RBP15.11■□□□□ 0.01
EBF3-201ENST00000355311 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 NOX5Q96PH1 765 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
EBF3-201ENST00000355311 GOLGA6BA6NDN3 693 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 RBM46Q8TBY0 533 aaKnown RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
EBF3-201ENST00000355311 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 COL5A3P25940 1745 aaPredicted RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 SHTN1A0MZ66 631 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 TMEM110-MUSTN1A8MSY1 372 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 MMP14P50281 582 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 LRRC63Q05C16 580 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 PPP4R3AQ6IN85 833 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 WRAP73Q9P2S5 460 aaPredicted RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 PI4KBQ9UBF8 816 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 ARMCX3Q9UH62 379 aaPredicted RBP15.1■□□□□ 0.01
EBF3-201ENST00000355311 BRCA2P51587 3418 aa15.1■□□□□ 0.01
EBF3-201ENST00000355311 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 EBAG9O00559 213 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 SCP2P22307 547 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 SLC12A3P55017 1021 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 AADACL2Q6P093 401 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 RETREG2Q8NC44 543 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 KCTD10Q9H3F6 313 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 ESYT2A0FGR8 921 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 OPLAHO14841 1288 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 HEXIM1O94992 359 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 ASIC2Q16515 512 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 HAUS3Q68CZ6 603 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 ZNF746Q6NUN9 644 aaPredicted RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 UHMK1Q8TAS1 419 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 EIF2AK1Q9BQI3 630 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 TMEM39BQ9GZU3 492 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 DDX47Q9H0S4 455 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 CEP83Q9Y592 693 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 PCDHA2Q9Y5H9 948 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 H0YHG0 523 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 ITGA4P13612 1032 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 ZNF211Q13398 564 aaPredicted RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 ZCWPW2Q504Y3 356 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 SUGP1Q8IWZ8 645 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
EBF3-201ENST00000355311 MED4Q9NPJ6 270 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 GOLGA6AQ9NYA3 693 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
EBF3-201ENST00000355311 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
EBF3-201ENST00000355311 CLSTN1O94985 981 aa15.08■□□□□ 0
EBF3-201ENST00000355311 ARP10275 920 aa15.08■□□□□ 0
EBF3-201ENST00000355311 BMP3P12645 472 aa15.08■□□□□ 0
EBF3-201ENST00000355311 HOXA10P31260 410 aaPredicted RBP15.08■□□□□ 0
EBF3-201ENST00000355311 HPDP32754 393 aaPredicted RBP15.08■□□□□ 0
EBF3-201ENST00000355311 PDE6BP35913 854 aa15.08■□□□□ 0
EBF3-201ENST00000355311 GNGT1P63211 74 aa15.08■□□□□ 0
EBF3-201ENST00000355311 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0
EBF3-201ENST00000355311 EXOC3L4Q17RC7 722 aa15.08■□□□□ 0
EBF3-201ENST00000355311 EHBP1Q8NDI1 1231 aa15.08■□□□□ 0
EBF3-201ENST00000355311 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
EBF3-201ENST00000355311 CELF4Q9BZC1 486 aaKnown RBP15.08■□□□□ 0
EBF3-201ENST00000355311 NAV1Q8NEY1 1877 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms