RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 VAV2P52735 878 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 RHBDL3P58872 404 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 MXRA7P84157 204 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 GUCY2DQ02846 1103 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 GFPT1Q06210 699 aaPredicted RBP10.24□□□□□ -0.77
SMG6-202ENST00000354901 ECM1Q16610 540 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 FAM153CQ494X1 144 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 ANKRD20A8PQ5CZ79 823 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 SPATS2Q86XZ4 545 aaKnown RBP10.24□□□□□ -0.77
SMG6-202ENST00000354901 SUDS3Q9H7L9 328 aaPredicted RBP10.24□□□□□ -0.77
SMG6-202ENST00000354901 FAM153AQ9UHL3 310 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 RPS6KL1Q9Y6S9 549 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 EVI5O60447 810 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USO1O60763 962 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 MDH1P40925 334 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 RASSF7Q02833 373 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 MFSD4BQ5TF39 518 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 TLDC1Q6P9B6 456 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 CUL5Q93034 780 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 FGFBP2Q9BYJ0 223 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 PCDHA13Q9Y5I0 950 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 E9PMD0 336 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 TACC1O75410 805 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 MAGEA1P43355 309 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 CACNB3P54284 484 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 SNAP25P60880 206 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 IQCEQ6IPM2 695 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L6PQ6QN14 398 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 LBHD1Q9BQE6 289 aaPredicted RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 OSBPL1AQ9BXW6 950 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 ACTR5Q9H9F9 607 aaPredicted RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 MAST2Q6P0Q8 1798 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 CNGA1P29973 690 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 CARSP49589 748 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 CTCFP49711 727 aaPredicted RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 SHROOM1Q2M3G4 852 aaPredicted RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 PAPD7Q5XG87 772 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 CENPPQ6IPU0 288 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 UNC13DQ70J99 1090 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 KIF2BQ8N4N8 673 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 AENQ8WTP8 325 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 EPB41L5Q9HCM4 733 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 DDX4Q9NQI0 724 aaKnown RBP10.23□□□□□ -0.77
SMG6-202ENST00000354901 MTMR4Q9NYA4 1195 aa10.23□□□□□ -0.77
SMG6-202ENST00000354901 LAMB1P07942 1786 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 PLSCR1O15162 318 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 FAM107AO95990 144 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 KRT18P05783 430 aaKnown RBP10.22□□□□□ -0.77
SMG6-202ENST00000354901 SCNN1BP51168 640 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 TCP10Q12799 353 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 ADGRF4Q8IZF3 695 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 SPICE1Q8N0Z3 855 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 RETREG2Q8NC44 543 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 FLAD1Q8NFF5 587 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 SEC16BQ96JE7 1060 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 ERGIC2Q96RQ1 377 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMG6-202ENST00000354901 TSGA10Q9BZW7 698 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
SMG6-202ENST00000354901 ROBO3Q96MS0 1386 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 EDIL3O43854 480 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 SERPINB2P05120 415 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 TAL1P17542 331 aaPredicted RBP10.22□□□□□ -0.77
SMG6-202ENST00000354901 ELF3P78545 371 aaPredicted RBP10.22□□□□□ -0.77
SMG6-202ENST00000354901 MAN2A1Q16706 1144 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 DNAAF5Q86Y56 855 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 TRIM58Q8NG06 486 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 AGAP11Q8TF27 550 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 RAD54LQ92698 747 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 MTMR9Q96QG7 549 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 MAGEF1Q9HAY2 307 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 PAPOLBQ9NRJ5 636 aaKnown RBP10.22□□□□□ -0.77
SMG6-202ENST00000354901 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 PLAGL2Q9UPG8 496 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 C15orf41Q9Y2V0 281 aa10.22□□□□□ -0.77
SMG6-202ENST00000354901 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PYGBP11216 843 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PLCG2P16885 1265 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 STAT3P40763 770 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 SLC1A4P43007 532 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 EPHB4P54760 987 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 TAX1BP1Q86VP1 789 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 MS4A14Q96JA4 679 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms