RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 REEP2Q9BRK0 252 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 FAM213AQ9BRX8 229 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 AGTPBP1Q9UPW5 1226 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 TMX2Q9Y320 296 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 TXNP10599 105 aaKnown RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 ZSCAN26Q16670 478 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 SEC31AO94979 1220 aaKnown RBP13.46□□□□□ -0.26
PCDHB11-201ENST00000354757 ARP10275 920 aa13.46□□□□□ -0.26
PCDHB11-201ENST00000354757 KCNH2Q12809 1159 aa13.46□□□□□ -0.26
PCDHB11-201ENST00000354757 TAF1CQ15572 869 aaPredicted RBP13.46□□□□□ -0.26
PCDHB11-201ENST00000354757 THAP9Q9H5L6 903 aa13.46□□□□□ -0.26
PCDHB11-201ENST00000354757 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 TTC26A0AVF1 554 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 TNNC2P02585 160 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 DPYDQ12882 1025 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 PSMD2Q13200 908 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 JPH1Q9HDC5 661 aaPredicted RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 ZNF302Q9NR11 478 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 GAKO14976 1311 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 MSH4O15457 936 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 CYP2B6P20813 491 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 EPHX2P34913 555 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 VAV2P52735 878 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 BACE1P56817 501 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 LACTBP83111 547 aaPredicted RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 MESDQ14696 234 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 CCL15Q16663 113 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 CDR2LQ86X02 465 aaPredicted RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 ANKRD13AQ8IZ07 590 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 RETREG2Q8NC44 543 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 SLC9A2Q9UBY0 812 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 SYNJ2BP-COX16A0A087WUM0 186 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 RGL2O15211 777 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 ZMYND10O75800 440 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 FTCDO95954 541 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 JAK3P52333 1124 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 TAF12Q16514 161 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 KNOP1Q1ED39 458 aaKnown RBP13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 C7orf31Q8N865 590 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 KIFC3Q9BVG8 833 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 HAUS4Q9H6D7 363 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 TMEM206Q9H813 350 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 COX16Q9P0S2 106 aa13.45□□□□□ -0.26
PCDHB11-201ENST00000354757 C19orf81C9J6K1 198 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 MFAP3LO75121 409 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 YWHABP31946 246 aaKnown RBP13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 PSMC5P62195 406 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 PDIA5Q14554 519 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 TOGARAM2Q6ZUX3 1019 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 CATSPER3Q86XQ3 398 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 RIOX1Q9H6W3 641 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 PCDHB4Q9Y5E5 795 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 SLIT2O94813 1529 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 TNNC1P63316 161 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 ZBED6P86452 979 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 LIN9Q5TKA1 542 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 MSANTD4Q8NCY6 345 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 EHD4Q9H223 541 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 LGALS16A8MUM7 142 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 TUBB4AP04350 444 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 PDE6CP51160 858 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 APBB1IPQ7Z5R6 666 aaPredicted RBP13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 RNF34Q969K3 372 aa13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 NHEJ1Q9H9Q4 299 aaPredicted RBP13.44□□□□□ -0.26
PCDHB11-201ENST00000354757 NDUFA10O95299 355 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 EPHA7Q15375 998 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 SCYL2Q6P3W7 929 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 DLK2Q6UY11 383 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 GUF1Q8N442 669 aaKnown RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 KCNG1Q9UIX4 513 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 ASTN2O75129 1339 aaPredicted RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 IFNB1P01574 187 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 MYL3P08590 195 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 MYBP10242 640 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 SSTR3P32745 418 aaPredicted RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 TMEM62Q0P6H9 643 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 TFDP1Q14186 410 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 PURBQ96QR8 312 aaKnown RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 PSMD1Q99460 953 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms