RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SRCAPQ6ZRS2 3230 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 TBCAO75347 108 aaKnown RBP21.44■■□□□ 1.02
COL13A1-201ENST00000354547 KRT14P02533 472 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 RPA1P27694 616 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 SH2D3CQ8N5H7 860 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 SYT2Q8N9I0 419 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-201ENST00000354547 GLT8D2Q9H1C3 349 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 NYAP2Q9P242 653 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 AJAP1Q9UKB5 411 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-201ENST00000354547 MYO3BQ8WXR4 1341 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 CYP3A7-CYP3A51PA0A087WV96 503 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 HSF2BPO75031 334 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 CFBP00751 764 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 NPR1P16066 1061 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 CYP3A7P24462 503 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 PON1P27169 355 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 ITIH3Q06033 890 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 SYDE2Q5VT97 1194 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 TAF4BQ92750 862 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 AIPL1Q9NZN9 384 aa21.44■■□□□ 1.02
COL13A1-201ENST00000354547 TMCO5BA8MYB1 307 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 EDRF1Q3B7T1 1238 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 ZC2HC1CQ53FD0 456 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-201ENST00000354547 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
COL13A1-201ENST00000354547 CCDC43Q96MW1 224 aaKnown RBP21.43■■□□□ 1.02
COL13A1-201ENST00000354547 SMCHD1A6NHR9 2005 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 NR3C1P04150 777 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 NMT1P30419 496 aaKnown RBP21.43■■□□□ 1.02
COL13A1-201ENST00000354547 MARSP56192 900 aaKnown RBP21.43■■□□□ 1.02
COL13A1-201ENST00000354547 MEI1Q5TIA1 1274 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 IRF2BP2Q7Z5L9 587 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 IFT20Q8IY31 132 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 ZDHHC15Q96MV8 337 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 FOCADQ5VW36 1801 aa21.43■■□□□ 1.02
COL13A1-201ENST00000354547 AP3B2Q13367 1082 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 EIF2AK1Q9BQI3 630 aaKnown RBP21.42■■□□□ 1.02
COL13A1-201ENST00000354547 TSKSQ9UJT2 592 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 RABGAP1Q9Y3P9 1069 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 PITPNM2Q9BZ72 1349 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 FRMD3A2A2Y4 597 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 CEP104O60308 925 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 MMP10P09238 476 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 RPS6KA1Q15418 735 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 ALKBH5Q6P6C2 394 aaKnown RBP21.42■■□□□ 1.02
COL13A1-201ENST00000354547 MKL1Q969V6 931 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 ZIM3Q96PE6 472 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 AP1M1Q9BXS5 423 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 GCNT4Q9P109 453 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 UBR3Q6ZT12 1888 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 ALDH1B1P30837 517 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 ATP1A2P50993 1020 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 PLS1Q14651 629 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 CCDC174Q6PII3 467 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 FOXR2Q6PJQ5 311 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 MYCT1Q8N699 235 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 BCS1LQ9Y276 419 aa21.42■■□□□ 1.02
COL13A1-201ENST00000354547 CALUO43852 315 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-201ENST00000354547 BMP3P12645 472 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 ZYXQ15942 572 aaKnown RBP21.41■■□□□ 1.02
COL13A1-201ENST00000354547 EMBQ6PCB8 327 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 A0A1W2PRG0 241 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 ECE1P42892 770 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 HLTFQ14527 1009 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL13A1-201ENST00000354547 RRP1BQ14684 758 aaKnown RBP21.41■■□□□ 1.02
COL13A1-201ENST00000354547 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 PCDHGC5Q9Y5F6 944 aa21.41■■□□□ 1.02
COL13A1-201ENST00000354547 RAD51CO43502 376 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 GFPT2O94808 682 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 EPB41P11171 864 aaKnown RBP21.4■■□□□ 1.02
COL13A1-201ENST00000354547 COG2Q14746 738 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 TTMPQ5BVD1 217 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 TRMT1LQ7Z2T5 733 aaKnown RBP21.4■■□□□ 1.02
COL13A1-201ENST00000354547 FRMD5Q7Z6J6 570 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 COL23A1Q86Y22 540 aaPredicted RBP21.4■■□□□ 1.02
COL13A1-201ENST00000354547 CASKIN2Q8WXE0 1202 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 MBOAT7Q96N66 472 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 NAGPAQ9UK23 515 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 OPLAHO14841 1288 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 RDH13Q8NBN7 331 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 TRAF3IP3Q9Y228 551 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 ASTN1O14525 1302 aa21.4■■□□□ 1.02
COL13A1-201ENST00000354547 ECE2O60344 883 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 SREBF1P36956 1147 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 GNGT1P63211 74 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 PODNQ7Z5L7 613 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.02
COL13A1-201ENST00000354547 CAPS2Q9BXY5 557 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 CENPHQ9H3R5 247 aa21.39■■□□□ 1.02
COL13A1-201ENST00000354547 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.39■■□□□ 1.02
COL13A1-201ENST00000354547 OPA1O60313 960 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 FAM13AO94988 1023 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 IRAK1P51617 712 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 Q4G0T1 1027 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 CFAP58Q5T655 872 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 GBP6Q6ZN66 633 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 MAEAQ7L5Y9 396 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms