RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.41
CAPN9-202ENST00000354537 MTMR7Q9Y216 660 aa12.46□□□□□ -0.41
CAPN9-202ENST00000354537 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
CAPN9-202ENST00000354537 DAAM1Q9Y4D1 1078 aa12.46□□□□□ -0.41
CAPN9-202ENST00000354537 TAF1P21675 1872 aa12.46□□□□□ -0.41
CAPN9-202ENST00000354537 USP17L5A8MUK1 530 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.42
CAPN9-202ENST00000354537 DDB1Q16531 1140 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.42
CAPN9-202ENST00000354537 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 HOOK3Q86VS8 718 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 FUKQ8N0W3 1084 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.42
CAPN9-202ENST00000354537 PSMD1Q99460 953 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 ARMCX3Q9UH62 379 aaPredicted RBP12.46□□□□□ -0.42
CAPN9-202ENST00000354537 MCM8Q9UJA3 840 aa12.46□□□□□ -0.42
CAPN9-202ENST00000354537 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 F8VZ95 297 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 PDXKO00764 312 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 NUDT17P0C025 328 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 FERP16591 822 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 CYP11B2P19099 503 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 DNA2P51530 1060 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 DRG2P55039 364 aaKnown RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 JAM2P57087 298 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 RNASE9P60153 205 aaKnown RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 BYSLQ13895 437 aaKnown RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 ODF2Q5BJF6 829 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 NT5DC3Q86UY8 548 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 UBLCP1Q8WVY7 318 aaPredicted RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 CUL5Q93034 780 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 JPH2Q9BR39 696 aaPredicted RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 NEUROG2Q9H2A3 272 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 FAM187AA6NFU0 413 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 ZPR1O75312 459 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 GSTA1P08263 222 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 DRD4P21917 467 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 PON1P27169 355 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 TM4SF1P30408 202 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 SLC8A1P32418 973 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 GBP1P32455 592 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 ARID5AQ03989 594 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 ERMARDQ5T6L9 678 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 GPBP1Q86WP2 473 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 UBA5Q9GZZ9 404 aa12.45□□□□□ -0.42
CAPN9-202ENST00000354537 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
CAPN9-202ENST00000354537 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 ASAP2O43150 1006 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 DAPK3O43293 454 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 MARCH6O60337 910 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CYP3A7P24462 503 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 NR2F2P24468 414 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 MMP14P50281 582 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 EPHA7Q15375 998 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CYB5D1Q6P9G0 228 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 GPATCH11Q8N954 259 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 GIMAP7Q8NHV1 300 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CCT6BQ92526 530 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 COA7Q96BR5 231 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 PGM2Q96G03 612 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 MBOAT7Q96N66 472 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 MTMR4Q9NYA4 1195 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CNOT8Q9UFF9 292 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 NCANO14594 1321 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 IGKV6D-41A0A0C4DH26 115 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 DNM1LO00429 736 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 TRIM37O94972 964 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 BTDP43251 543 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 SCTRP47872 440 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 TNNI2P48788 182 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
CAPN9-202ENST00000354537 ITIH4Q14624 930 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 NELFCDQ8IXH7 590 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 OR2W6PQ8NHA6 318 aa12.44□□□□□ -0.42
CAPN9-202ENST00000354537 CHMP6Q96FZ7 201 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms