RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 WDR70Q9NW82 654 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 SLC9A2Q9UBY0 812 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 ADAMTS1Q9UHI8 967 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 DISP2A7MBM2 1401 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 GUCY2FP51841 1108 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 LRRC63Q05C16 580 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 TWF2Q6IBS0 349 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 SLC35F6Q8N357 371 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 THAP9Q9H5L6 903 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 RABEP2Q9H5N1 569 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 JPH1Q9HDC5 661 aaPredicted RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 PCDHA10Q9Y5I2 948 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 NMT1P30419 496 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 PSMC5P62195 406 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 PSPC1Q8WXF1 523 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 CAP2P40123 477 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 MAP1SQ66K74 1059 aaPredicted RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 DPH5Q9H2P9 285 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 SNX25Q9H3E2 840 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 ERCC6LQ2NKX8 1250 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 VSTM4Q8IW00 320 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 MYO1FO00160 1098 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 SND1Q7KZF4 910 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMC6-201ENST00000351948 RSRC2Q7L4I2 434 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 MTRQ99707 1265 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 RAB20Q9NX57 234 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 BAZ2BQ9UIF8 2168 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 DYNC1LI2O43237 492 aaPredicted RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 FERP16591 822 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 LMBRD2Q68DH5 695 aaPredicted RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 KIAA1841Q6NSI8 718 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 DDX4Q9NQI0 724 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 ANAPC4Q9UJX5 808 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 PCDHAC2Q9Y5I4 1007 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 XPOTO43592 962 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 FTCDO95954 541 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 TRIM49P0CI25 452 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 TRIM49CP0CI26 452 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 IL1R1P14778 569 aa14.89□□□□□ -0.03
SMC6-201ENST00000351948 GPR161Q8N6U8 529 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 UHMK1Q8TAS1 419 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 DDX41Q9UJV9 622 aaKnown RBP14.89□□□□□ -0.03
SMC6-201ENST00000351948 HIP1RO75146 1068 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 NBPF11Q86T75 865 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 IFT20Q8IY31 132 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 ANKRD13AQ8IZ07 590 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 PPP1R13BQ96KQ4 1090 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 SEPT10Q9P0V9 454 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
SMC6-201ENST00000351948 RPS6P62753 249 aaKnown RBP14.88□□□□□ -0.03
SMC6-201ENST00000351948 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 RNF8O76064 485 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 HDLBPQ00341 1268 aaKnown RBP14.88□□□□□ -0.03
SMC6-201ENST00000351948 PLA2G4FQ68DD2 849 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 KSR1Q8IVT5 923 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 PRKAG2Q9UGJ0 569 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 SFNP31947 248 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 STAT5BP51692 787 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 TRIM50Q86XT4 487 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 EXOC8Q8IYI6 725 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 XXYLT1Q8NBI6 393 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
SMC6-201ENST00000351948 YWHABP31946 246 aaKnown RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 EPHX2P34913 555 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 HDXQ7Z353 690 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 SCYL3Q8IZE3 742 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 HEXIM2Q96MH2 286 aaKnown RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 GABPAQ06546 454 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 NME8Q8N427 588 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 GIMAP8Q8ND71 665 aaPredicted RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 FAM167AQ96KS9 214 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 TAAR1Q96RJ0 339 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 NHEJ1Q9H9Q4 299 aaPredicted RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 STK10O94804 968 aaKnown RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 BFSP1Q12934 665 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 TCP11Q8WWU5 503 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 TEX33O43247 280 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 C6orf222P0C671 652 aaPredicted RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 FDX1P10109 184 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 CAPN2P17655 700 aa14.87□□□□□ -0.03
SMC6-201ENST00000351948 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 FHDC1Q9C0D6 1143 aaPredicted RBP14.87□□□□□ -0.03
SMC6-201ENST00000351948 WNT10BO00744 389 aa14.86□□□□□ -0.03
SMC6-201ENST00000351948 MOCS3O95396 460 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms