RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 NLRX1Q86UT6 975 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 FAM151AQ8WW52 585 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 ELMO3Q96BJ8 720 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 TEKT3Q9BXF9 490 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 FRMD4BQ9Y2L6 1034 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 LAMB1P07942 1786 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 DDX60LQ5H9U9 1706 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 DLATP10515 647 aaKnown RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 CAPN2P17655 700 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 GABPAQ06546 454 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 TRAF1Q13077 416 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 GPS2Q13227 327 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 BRD3Q15059 726 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 ALS2CR12Q96Q35 445 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 RUFY1Q96T51 708 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 CUEDC2Q9H467 287 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 MYBP10242 640 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 PHLDB2Q86SQ0 1253 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 MTMR8Q96EF0 704 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 REEP2Q9BRK0 252 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 MSH4O15457 936 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 TRIM49P0CI25 452 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 TRIM49CP0CI26 452 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 ARP10275 920 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 SFMBT2Q5VUG0 894 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 GJB7Q6PEY0 223 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 VPS36Q86VN1 386 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 RPAP3Q9H6T3 665 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 HERC5Q9UII4 1024 aaKnown RBP11.4□□□□□ -0.58
SMPD4-201ENST00000351288 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
SMPD4-201ENST00000351288 ENTPD3O75355 529 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 FECHP22830 423 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 MAN2A1Q16706 1144 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 SLC9C1Q4G0N8 1177 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 SNRNP48Q6IEG0 339 aaKnown RBP11.39□□□□□ -0.59
SMPD4-201ENST00000351288 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
SMPD4-201ENST00000351288 STXBP4Q6ZWJ1 553 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 GGA3Q9NZ52 723 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 NAV1Q8NEY1 1877 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-201ENST00000351288 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 DNAJC19Q96DA6 116 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 ATG4CQ96DT6 458 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 MARK3P27448 753 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 VAV2P52735 878 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 NPEPPSP55786 919 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 PEX3P56589 373 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 TRADDQ15628 312 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 ASIC2Q16515 512 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 LRRC55Q6ZSA7 311 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-201ENST00000351288 MSANTD4Q8NCY6 345 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
SMPD4-201ENST00000351288 SBF2Q86WG5 1849 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 MAP2K7O14733 419 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 SLC9A1P19634 815 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 USP14P54578 494 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 BIRC3Q13489 604 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 MEA1Q16626 185 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 CEP55Q53EZ4 464 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 LXNQ9BS40 222 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 TRIM31Q9BZY9 425 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 HYOU1Q9Y4L1 999 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 EML1O00423 815 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 MTMR1Q13613 665 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 BAATQ14032 418 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 EXOC3L4Q17RC7 722 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
SMPD4-201ENST00000351288 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 EHD4Q9H223 541 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
SMPD4-201ENST00000351288 PLAGL2Q9UPG8 496 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms