RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLC16A3O15427 465 aaKnown RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 H2AFXP16104 143 aaPredicted RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 TUBB4BP68371 445 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 NFIL3Q16649 462 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 RSRC2Q7L4I2 434 aaKnown RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 ZNF280CQ8ND82 737 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 LXNQ9BS40 222 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 TSGA10Q9BZW7 698 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 ARHGAP20Q9P2F6 1191 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 ARMCX3Q9UH62 379 aaPredicted RBP18.38■□□□□ 0.53
SAMM50-201ENST00000350028 ZNF541Q9H0D2 1346 aa18.38■□□□□ 0.53
SAMM50-201ENST00000350028 ARHGEF35A5YM69 484 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 LCA5LO95447 670 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 P4HBP07237 508 aaKnown RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 ERCC3P19447 782 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 EPS15P42566 896 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 VAV2P52735 878 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 ZNF131P52739 623 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 DGKZQ13574 1117 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 FBXO38Q6PIJ6 1188 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 SRGAP1Q7Z6B7 1085 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 CCDC155Q8N6L0 562 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 IL31RAQ8NI17 732 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 C12orf42Q96LP6 360 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 ASTN1O14525 1302 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 SSU72P8A0A1W2PR75 194 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 VWA5AO00534 786 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 NR3C1P04150 777 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 PTPRAP18433 802 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 RPS6P62753 249 aaKnown RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 MRPS9P82933 396 aaKnown RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 WHAMMP3Q1A5X7 153 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 ANGEL2Q5VTE6 544 aaKnown RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 ZSWIM4Q9H7M6 989 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 WRAP73Q9P2S5 460 aaPredicted RBP18.37■□□□□ 0.53
SAMM50-201ENST00000350028 PPP2R3BQ9Y5P8 575 aa18.37■□□□□ 0.53
SAMM50-201ENST00000350028 SFI1A8K8P3 1242 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 ZBTB39O15060 712 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 NOL4O94818 638 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 EPB41P11171 864 aaKnown RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 EIF4A3P38919 411 aaKnown RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 KIF5AQ12840 1032 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 PGM5Q15124 567 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 TXLNBQ8N3L3 684 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 GPR161Q8N6U8 529 aaKnown RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 RABGGTAQ92696 567 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 WRNIP1Q96S55 665 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 DEF6Q9H4E7 631 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 ARGLU1Q9NWB6 273 aaPredicted RBP18.36■□□□□ 0.53
SAMM50-201ENST00000350028 TRIM10Q9UDY6 481 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 PARP14Q460N5 1801 aa18.36■□□□□ 0.53
SAMM50-201ENST00000350028 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 LYPLA2O95372 231 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 NMT1P30419 496 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 KIF11P52732 1056 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 OAZ1P54368 228 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 MTMR1Q13613 665 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 SFMBT2Q5VUG0 894 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 ZNF720Q7Z2F6 126 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 BANK1Q8NDB2 785 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PURBQ96QR8 312 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PCDHB13Q9Y5F0 798 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PCDHA13Q9Y5I0 950 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 DICER1Q9UPY3 1922 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 AKR1B10O60218 316 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 EIF2AK2P19525 551 aaKnown RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 ITGB3BPQ13352 177 aaPredicted RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 SLC9C1Q4G0N8 1177 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 FAM178BQ8IXR5 827 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 LACRTQ9GZZ8 138 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 POLD4Q9HCU8 107 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 NLRC4Q9NPP4 1024 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PLCB1Q9NQ66 1216 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
SAMM50-201ENST00000350028 MYO6Q9UM54 1294 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms