RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 IRF5Q13568 498 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 TXNDC9O14530 226 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 CALB2P22676 271 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 RPS6KB1P23443 525 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 PRKG1Q13976 671 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 OTUD6AQ7L8S5 288 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 DHTKD1Q96HY7 919 aaPredicted RBP13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 UBE2Q2LH0YL09 131 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 PDGFRBP09619 1106 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 HOXB7P09629 217 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 PHEXP78562 749 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 CLPPQ16740 277 aaPredicted RBP13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 DDHD1Q8NEL9 900 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 MDM1Q8TC05 714 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 PTPRN2Q92932 1015 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 SKA1Q96BD8 255 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 NUP85Q9BW27 656 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 CTNNAL1Q9UBT7 734 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 DACH1Q9UI36 760 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.3
CTNNB1-201ENST00000349496 MAP3K7O43318 606 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 SUN1O94901 812 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 CXCR5P32302 372 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 STX17P56962 302 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 ZCWPW2Q504Y3 356 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 HACD3Q9P035 362 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 ZNF609O15014 1411 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 AP3B1O00203 1094 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 BASP1P80723 227 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 TMTC4Q5T4D3 741 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 MGARPQ8TDB4 240 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 METTL5Q9NRN9 209 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 SELENONQ9NZV5 590 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 WWC3Q9ULE0 1092 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 AOX1Q06278 1338 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 TRPA1O75762 1119 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 PTDSS1P48651 473 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 EVA1CP58658 441 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 GSTM4Q03013 218 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 PATL1Q86TB9 770 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 GDAP1Q8TB36 358 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 XPO6Q96QU8 1125 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
CTNNB1-201ENST00000349496 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 ZPR1O75312 459 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 CD97P48960 835 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 HPCAP84074 193 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 DTX3LQ8TDB6 740 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 FHDC1Q9C0D6 1143 aaPredicted RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 GOLGA8IPA6NC78 632 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 NOTOA8MTQ0 251 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 FOSL1P15407 271 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 VAV1P15498 845 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 KRT9P35527 623 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
CTNNB1-201ENST00000349496 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 ASLP04424 464 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 COPS2P61201 443 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 CABP7Q86V35 215 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
CTNNB1-201ENST00000349496 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms