RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ERVK-9P63128 1117 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 PIGOQ8TEQ8 1089 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 COA1Q9GZY4 146 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 LUC7LQ9NQ29 371 aaKnown RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 RNF14Q9UBS8 474 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 EML1O00423 815 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 GDF11O95390 407 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 PAK2Q13177 524 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 EDRF1Q3B7T1 1238 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 RUBCNQ92622 972 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 CYP3A7-CYP3A51PA0A087WV96 503 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 AFPP02771 609 aaKnown RBP19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 HLA-DOAP06340 250 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 ITGA4P13612 1032 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 CYP3A7P24462 503 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 KIAA0825Q8IV33 1275 aa19.81■□□□□ 0.76
PTP4A3-202ENST00000349124 KIF4AO95239 1232 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 LIG3P49916 1009 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 IKQ13123 557 aaPredicted RBP19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 HLTFQ14527 1009 aaKnown RBP eCLIP19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 SYT2Q8N9I0 419 aaPredicted RBP19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 CRYGNQ8WXF5 182 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 TAF4BQ92750 862 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 DDX47Q9H0S4 455 aaKnown RBP19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 TRAF3IP3Q9Y228 551 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 FAM169AQ9Y6X4 670 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 XRCC5P13010 732 aaKnown RBP19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 JAG1P78504 1218 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 SH3BP5LQ7L8J4 393 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 METTL13Q8N6R0 699 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 LRRC57Q8N9N7 239 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 NEUROG2Q9H2A3 272 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 CENPHQ9H3R5 247 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 DBNDD1Q9H9R9 158 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 SIX2Q9NPC8 291 aa19.8■□□□□ 0.76
PTP4A3-202ENST00000349124 TMCO5BA8MYB1 307 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 POLRMTO00411 1230 aaKnown RBP19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 EBAG9O00559 213 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 GCNT3O95395 438 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 FLT3P36888 993 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 EPHA7Q15375 998 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 CERKLQ49MI3 558 aaPredicted RBP19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 ZC2HC1CQ53FD0 456 aaPredicted RBP19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 EPM2AIP1Q7L775 607 aaPredicted RBP19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 SP8Q8IXZ3 490 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 CRAMP1Q96RY5 1269 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 TMEM59LQ9UK28 342 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 MSH4O15457 936 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 NR3C1P04150 777 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 RPA1P27694 616 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 FRMD5Q7Z6J6 570 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 SLFN12Q8IYM2 578 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 MBOAT7Q96N66 472 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 PLAAQ9Y263 795 aa19.79■□□□□ 0.76
PTP4A3-202ENST00000349124 ASTN1O14525 1302 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 PITPNM2Q9BZ72 1349 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 F5H6K3 240 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 DDX3XO00571 662 aaKnown RBP eCLIP19.78■□□□□ 0.762e-14■■■■□ 20.6
PTP4A3-202ENST00000349124 GFPT2O94808 682 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 ECHS1P30084 290 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 SEC24CP53992 1094 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 KLRC3Q07444 240 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 CTTNQ14247 550 aaKnown RBP19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 COG2Q14746 738 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 MAATS1Q7Z4T9 603 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 SPICE1Q8N0Z3 855 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 MICALL1Q8N3F8 863 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 TEKT1Q969V4 418 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 SLC35C1Q96A29 364 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 NMT1P30419 496 aaKnown RBP19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 CRKP46108 304 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 RBM5P52756 815 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 SKOR1P84550 965 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 TPCN2Q8NHX9 752 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 BCS1LQ9Y276 419 aa19.78■□□□□ 0.76
PTP4A3-202ENST00000349124 SART1O43290 800 aaKnown RBP19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 CEP85LQ5SZL2 805 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 GBP6Q6ZN66 633 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 U2AF1L4Q8WU68 220 aaKnown RBP19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 SCFD2Q8WU76 684 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 PLCB1Q9NQ66 1216 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 GCNT4Q9P109 453 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 NHSQ6T4R5 1651 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 G3V3G9 751 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 NDUFAB1O14561 156 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 OPLAHO14841 1288 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 TGFB1I1O43294 461 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 ZBTB48P10074 688 aaPredicted RBP19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 DCAF8Q5TAQ9 597 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 PPP4R3CPQ6ZMV5 832 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 OSGEPQ9NPF4 335 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 AMACRQ9UHK6 382 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 NR2E1Q9Y466 385 aa19.77■□□□□ 0.76
PTP4A3-202ENST00000349124 CHMP2AO43633 222 aa19.76■□□□□ 0.75
PTP4A3-202ENST00000349124 HPDP32754 393 aaPredicted RBP19.76■□□□□ 0.75
PTP4A3-202ENST00000349124 TTC31Q49AM3 519 aaPredicted RBP19.76■□□□□ 0.75
PTP4A3-202ENST00000349124 FAM198AQ9UFP1 575 aa19.76■□□□□ 0.75
PTP4A3-202ENST00000349124 TNNC1P63316 161 aa19.76■□□□□ 0.75
PTP4A3-202ENST00000349124 UBXN2AP68543 259 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms