RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
TRIM4-201ENST00000349062 PACSIN2Q9UNF0 486 aaPredicted RBP15.28■□□□□ 0.04
TRIM4-201ENST00000349062 A0A1W2PQC6 194 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 SLITRK3O94933 977 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 PSMD1Q99460 953 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
TRIM4-201ENST00000349062 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 MYO6Q9UM54 1294 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 COL4A5P29400 1685 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 CTAGE15A4D2H0 777 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 TBC1D8O95759 1140 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 CTAGE8P0CG41 777 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 FKBP1AP62942 108 aaKnown RBP15.27■□□□□ 0.04
TRIM4-201ENST00000349062 KRT83P78385 493 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 PPARDQ03181 441 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 CTAGE6Q86UF2 777 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 CTAGE4Q8IX94 777 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 FAM84AQ96KN4 292 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 CDC23Q9UJX2 597 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 ZNF263O14978 683 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 ITGB5P18084 799 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 NPEPPSP55786 919 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
TRIM4-201ENST00000349062 FAM193AP78312 1265 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 KCNMA1Q12791 1236 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 EEPD1Q7L9B9 569 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 OTOP1Q7RTM1 612 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 FAM20AQ96MK3 541 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 NUP58Q9BVL2 599 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 PDE11AQ9HCR9 933 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
TRIM4-201ENST00000349062 GOLGA8IPA6NC78 632 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 GOLGA8JA6NMD2 632 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
TRIM4-201ENST00000349062 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.03
TRIM4-201ENST00000349062 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 GSPT2Q8IYD1 628 aaKnown RBP15.27■□□□□ 0.03
TRIM4-201ENST00000349062 DNAJC7Q99615 494 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 VAV3Q9UKW4 847 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 RIPK3Q9Y572 518 aa15.27■□□□□ 0.03
TRIM4-201ENST00000349062 AKAP3O75969 853 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 KNOP1Q1ED39 458 aaKnown RBP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 SYT2Q8N9I0 419 aaPredicted RBP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 PRPF38AQ8NAV1 312 aaKnown RBP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 RMDN3Q96TC7 470 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 TEKT3Q9BXF9 490 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 CCDC169A6NNP5 214 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 XRCC5P13010 732 aaKnown RBP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 KLHL30Q0D2K2 578 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 TNIP1Q15025 636 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 ARHGEF16Q5VV41 709 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
TRIM4-201ENST00000349062 PCDHA13Q9Y5I0 950 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
TRIM4-201ENST00000349062 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 NR3C1P04150 777 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 VCAM1P19320 739 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 PSMD2Q13200 908 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 LONRF2Q1L5Z9 754 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 SFMBT2Q5VUG0 894 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 RASSF4Q9H2L5 321 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 FAM53CQ9NYF3 392 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 SIK3Q9Y2K2 1263 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 ATRNL1Q5VV63 1379 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 K7ENM7 598 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 LRRN2O75325 713 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 FTCDO95954 541 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 PRELPP51888 382 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
TRIM4-201ENST00000349062 AGBL3Q8NEM8 1001 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 FEM1BQ9UK73 627 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 LTBP1Q14766 1721 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 EXOC3O60645 756 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 C2orf54Q08AI8 447 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 SRGAP1Q7Z6B7 1085 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 PROCA1Q8NCQ7 364 aaPredicted RBP15.25■□□□□ 0.03
TRIM4-201ENST00000349062 PACSIN1Q9BY11 444 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 HAUS4Q9H6D7 363 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 NRXN2Q9P2S2 1712 aa15.25■□□□□ 0.03
TRIM4-201ENST00000349062 ATP9AO75110 1047 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 PPP1R2P41236 205 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 MTMR1Q13613 665 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 TTLL12Q14166 644 aaPredicted RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 Q4G0T1 1027 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 ERGIC2Q96RQ1 377 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms