RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
PTBP1-201ENST00000349038 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
PTBP1-201ENST00000349038 ACSL3O95573 720 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
PTBP1-201ENST00000349038 CCDC6Q16204 474 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 ADGRA1Q86SQ6 560 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 TMEM165Q9HC07 324 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
PTBP1-201ENST00000349038 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 GRID2IPA4D2P6 1211 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 DNAJC8O75937 253 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-201ENST00000349038 NBPF20Q3BBV1 942 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 METTL13Q8N6R0 699 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 BATF3Q9NR55 127 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
PTBP1-201ENST00000349038 MSH2P43246 934 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 BIRC3Q13489 604 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 AADACL2Q6P093 401 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 NKX1-2Q9UD57 310 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-201ENST00000349038 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
PTBP1-201ENST00000349038 ATXN2Q99700 1313 aaKnown RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 CALM1P0DP23 149 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 CALM2P0DP24 149 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 CALM3P0DP25 149 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 RAB27AP51159 221 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 LONRF1Q17RB8 773 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 C11orf91Q3C1V1 193 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 FBF1Q8TES7 1133 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 EBF2Q9HAK2 575 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 DDAH1O94760 285 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 LONP1P36776 959 aaKnown RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 NCALDP61601 193 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 MUM1Q2TAK8 710 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 DCAF17Q5H9S7 520 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 CDCA2Q69YH5 1023 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 GIMAP8Q8ND71 665 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 PIGBQ92521 554 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 DDX50Q9BQ39 737 aaKnown RBP16.47■□□□□ 0.23
PTBP1-201ENST00000349038 FAM129AQ9BZQ8 928 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
PTBP1-201ENST00000349038 SLIT2O94813 1529 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 F8VZ95 297 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 PPP1R15BQ5SWA1 713 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 ISLR2Q6UXK2 745 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 MAB21L3Q8N8X9 362 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 DTX3LQ8TDB6 740 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 PGRMC1O00264 195 aaKnown RBP16.46■□□□□ 0.23
PTBP1-201ENST00000349038 FGRP09769 529 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 SCNN1BP51168 640 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 CAPN12Q6ZSI9 719 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 TMC3Q7Z5M5 1100 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 INPP4AQ96PE3 977 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-201ENST00000349038 ZMYND12Q9H0C1 365 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
PTBP1-201ENST00000349038 KLRC4O43908 158 aa16.46■□□□□ 0.22
PTBP1-201ENST00000349038 SCG2P13521 617 aa16.46■□□□□ 0.22
PTBP1-201ENST00000349038 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.22
PTBP1-201ENST00000349038 ERMARDQ5T6L9 678 aa16.46■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF572Q7Z3I7 529 aaPredicted RBP16.46■□□□□ 0.22
PTBP1-201ENST00000349038 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.22
PTBP1-201ENST00000349038 STX8Q9UNK0 236 aa16.46■□□□□ 0.22
PTBP1-201ENST00000349038 H0YGN5 161 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 FBXO25Q8TCJ0 367 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 TRIM9Q9C026 710 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 NFS1Q9Y697 457 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 BLIDQ8IZY5 108 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
PTBP1-201ENST00000349038 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
PTBP1-201ENST00000349038 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
PTBP1-201ENST00000349038 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 USP17L12C9JPN9 530 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 USP17L21D6R901 530 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 TLR2O60603 784 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 PRLRP16471 622 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 RUBCNQ92622 972 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
PTBP1-201ENST00000349038 ADAM22Q9P0K1 906 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 CTNNAL1Q9UBT7 734 aa16.44■□□□□ 0.22
PTBP1-201ENST00000349038 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms