RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 MTA3Q9BTC8 594 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 STK38LQ9Y2H1 464 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 SEC31AO94979 1220 aaKnown RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 RNF168Q8IYW5 571 aaPredicted RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 ZNF579Q8NAF0 562 aaKnown RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 FAM20AQ96MK3 541 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 NOL3O60936 208 aaKnown RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 INHBAP08476 426 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 STOX1Q6ZVD7 989 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 SKA2Q8WVK7 121 aaPredicted RBP20.09■□□□□ 0.81
UBE3C-201ENST00000348165 CAPS2Q9BXY5 557 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 EFCC1Q9HA90 598 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 CLDN3O15551 220 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 TDP2O95551 362 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 SIX6OS1Q8N1H7 587 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 MCPH1Q8NEM0 835 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 SMYD2Q9NRG4 433 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 JRKLQ9Y4A0 524 aa20.09■□□□□ 0.81
UBE3C-201ENST00000348165 POTEFA5A3E0 1075 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 SURF1Q15526 300 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 POTEGQ6S5H5 508 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 POTEEQ6S8J3 1075 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 TBC1D16Q8TBP0 767 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 ZNF668Q96K58 619 aaPredicted RBP20.08■□□□□ 0.81
UBE3C-201ENST00000348165 BAIAP2L1Q9UHR4 511 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 SLC16A4O15374 487 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 ECEL1O95672 775 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 PRCPP42785 496 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 GCLMP48507 274 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 TRIP13Q15645 432 aaPredicted RBP20.08■□□□□ 0.81
UBE3C-201ENST00000348165 DNAAF3Q8N9W5 541 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 OR6B3Q8NGW1 331 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 RUNDC3BQ96NL0 473 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 ATP6V0A4Q9HBG4 840 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 FAM114A2Q9NRY5 505 aa20.08■□□□□ 0.81
UBE3C-201ENST00000348165 MCF2LO15068 1137 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 GBP1P32455 592 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 STAT3P40763 770 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 BASP1P80723 227 aaKnown RBP20.08■□□□□ 0.8
UBE3C-201ENST00000348165 DCLK2Q8N568 766 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 MYL3P08590 195 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 RCAN1P53805 252 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 PRPSAP1Q14558 356 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 CCDC38Q502W7 563 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 KCTD6Q8NC69 237 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 PANX2Q96RD6 677 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 DNAJC12Q9UKB3 198 aa20.08■□□□□ 0.8
UBE3C-201ENST00000348165 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 DSTYKQ6XUX3 929 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 MFAP3LO75121 409 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 ECE1P42892 770 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 MAPK6Q16659 721 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 RAD54LQ92698 747 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 NR3C1P04150 777 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 ZNF667Q5HYK9 610 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 FMR1NBQ8N0W7 255 aaPredicted RBP20.07■□□□□ 0.8
UBE3C-201ENST00000348165 BBS5Q8N3I7 341 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 XXYLT1Q8NBI6 393 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 A0A0G2JLW4 131 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 PRPSAP2O60256 369 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 ZNF18P17022 549 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 SWSAP1Q6NVH7 229 aa20.07■□□□□ 0.8
UBE3C-201ENST00000348165 ORC4O43929 436 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 SLC4A1P02730 911 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 KRT76Q01546 638 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 FAM71BQ8TC56 605 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 PNPLA7Q6ZV29 1317 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 PFDN6O15212 129 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 GUCY1A2P33402 732 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 PRR5LQ6MZQ0 368 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 DARS2Q6PI48 645 aaKnown RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 RYBPQ8N488 228 aaPredicted RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 TCP11Q8WWU5 503 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 MED4Q9NPJ6 270 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 FNDC3AQ9Y2H6 1198 aaKnown RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 RFX7Q2KHR2 1363 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 TYW5A2RUC4 315 aaKnown RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 ARHGAP42A6NI28 874 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 LIG3P49916 1009 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 TSTA3Q13630 321 aaPredicted RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 CDO1Q16878 200 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 GABBR1Q9UBS5 961 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 ANAPC5Q9UJX4 755 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 IPO5O00410 1097 aaKnown RBP20.06■□□□□ 0.8
UBE3C-201ENST00000348165 ERICH1Q86X53 443 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 MCUQ8NE86 351 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 AP1M1Q9BXS5 423 aa20.06■□□□□ 0.8
UBE3C-201ENST00000348165 VCX3BQ9H321 246 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms