RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TTI1O43156 1089 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 SH3BP5O60239 455 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CHN1P15882 459 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 PPP2R5CQ13362 524 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 LRRC14Q15048 493 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CYB5D1Q6P9G0 228 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 KDM7AQ6ZMT4 941 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 WDR75Q8IWA0 830 aaKnown RBP19.43■□□□□ 0.7
SMC4-201ENST00000344722 PNKPQ96T60 521 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CCDC87Q9NVE4 849 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CCT8L1PA6NM43 557 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 PRKAB2O43741 272 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 ARFIP2P53365 341 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 PDXDC1Q6P996 788 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 TRPM8Q7Z2W7 1104 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CHP1Q99653 195 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 DONSONQ9NYP3 566 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 PHF20L1A8MW92 1017 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 ANO5Q75V66 913 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 DEPTORQ8TB45 409 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 MTA3Q9BTC8 594 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 MXD3Q9BW11 206 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 TMEM206Q9H813 350 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 SUGCTQ9HAC7 445 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 AFG3L2Q9Y4W6 797 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 PDZD4Q76G19 769 aaPredicted RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 CCDC138Q96M89 665 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 ACCSQ96QU6 501 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 MLXIPLQ9NP71 852 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 GGPS1O95749 300 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 BASP1P80723 227 aaKnown RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 RSBN1LQ6PCB5 846 aaPredicted RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 FAM161BQ96MY7 647 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 UBN2Q6ZU65 1347 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 POLR1AO95602 1720 aaPredicted RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 DMP1Q13316 513 aaPredicted RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 KRT26Q7Z3Y9 468 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 NOD2Q9HC29 1040 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 FBXO2Q9UK22 296 aaPredicted RBP19.42■□□□□ 0.7
SMC4-201ENST00000344722 L1RE1Q9UN81 338 aa19.42■□□□□ 0.7
SMC4-201ENST00000344722 ECM2O94769 699 aaPredicted RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 HNRNPCP07910 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMC4-201ENST00000344722 TMPRSS15P98073 1019 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 LLGL1Q15334 1064 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 RBM43Q6ZSC3 357 aaKnown RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 TBC1D10CQ8IV04 446 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 LRRC47Q8N1G4 583 aaKnown RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 NT5C2P49902 561 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 FXR1P51114 621 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMC4-201ENST00000344722 EXOSC10Q01780 885 aaKnown RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 C16orf87Q6PH81 154 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 FBXO11Q86XK2 927 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 TTC17Q96AE7 1141 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 RNPC3Q96LT9 517 aaKnown RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 EIF2AQ9BY44 585 aaKnown RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 PCDHB4Q9Y5E5 795 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 TCP11X1B4DZS4 312 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 KRT37O76014 449 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 CHRNDQ07001 517 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 BBS9Q3SYG4 887 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 RGS9BPQ6ZS82 235 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 COPEO14579 308 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 PPP1R12AO14974 1030 aaPredicted RBP19.41■□□□□ 0.7
SMC4-201ENST00000344722 GSTA1P08263 222 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 GSTA2P09210 222 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 KLHL38Q2WGJ6 581 aa19.41■□□□□ 0.7
SMC4-201ENST00000344722 MCF2P10911 925 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 KCNB1Q14721 858 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 XKR9Q5GH70 373 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 TMEM154Q6P9G4 183 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 ICA1LQ8NDH6 482 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 OXER1Q8TDS5 423 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 GINM1Q9NU53 330 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 MID2Q9UJV3 735 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 POLR2MP0CAP2 368 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 ECE1P42892 770 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 NBPF20Q3BBV1 942 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 PI16Q6UXB8 463 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 VCPKMTQ9H867 229 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 APOBEC2Q9Y235 224 aaKnown RBP19.4■□□□□ 0.7
SMC4-201ENST00000344722 LY9Q9HBG7 655 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 GPC5P78333 572 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 DPP8Q6V1X1 898 aaPredicted RBP19.4■□□□□ 0.7
SMC4-201ENST00000344722 SUGP1Q8IWZ8 645 aaKnown RBP19.4■□□□□ 0.7
SMC4-201ENST00000344722 CDHR2Q9BYE9 1310 aa19.4■□□□□ 0.7
SMC4-201ENST00000344722 KIF1BO60333 1816 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 KRT14P02533 472 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 CDC27P30260 824 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 ARL4CP56559 192 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 FSCBQ5H9T9 825 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.7
SMC4-201ENST00000344722 PCDHA1Q9Y5I3 950 aa19.39■□□□□ 0.7
SMC4-201ENST00000344722 EEF1B2P24534 225 aaKnown RBP19.39■□□□□ 0.69
SMC4-201ENST00000344722 PCGF5Q86SE9 256 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 ELOA2Q8IYF1 753 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms