RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CEP131Q9UPN4 1083 aa22.69■■□□□ 1.22
CEACAM3-201ENST00000344550 CHD7Q9P2D1 2997 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 M0QZ92 97 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 PPFIA3O75145 1194 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 HTRA4P83105 476 aaPredicted RBP22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 ADGRE1Q14246 886 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 SWSAP1Q6NVH7 229 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 CCDC60Q8IWA6 550 aaPredicted RBP22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 SLC5A5Q92911 643 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 TOP1MTQ969P6 601 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 MBOAT7Q96N66 472 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 LARP6Q9BRS8 491 aaKnown RBP22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 PHF20Q9BVI0 1012 aa22.68■■□□□ 1.22
CEACAM3-201ENST00000344550 DDX39AO00148 427 aaKnown RBP22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 EDIL3O43854 480 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 JAK3P52333 1124 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 AK2P54819 239 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 IGBP1P78318 339 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 NPY5RQ15761 445 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 FBXO47Q5MNV8 452 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 MTHFD1LQ6UB35 978 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 TSHZ1Q6ZSZ6 1077 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 NAP1L4Q99733 375 aaKnown RBP22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 FTHL17Q9BXU8 183 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 LMCD1Q9NZU5 365 aa22.67■■□□□ 1.22
CEACAM3-201ENST00000344550 MICAL3Q7RTP6 2002 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 MSH4O15457 936 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 GTPBP6O43824 516 aaPredicted RBP22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 GAS7O60861 476 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 LPIN1Q14693 890 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 SP7Q8TDD2 431 aaPredicted RBP22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 SAMD11Q96NU1 681 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 CDY2AQ9Y6F7 541 aa22.66■■□□□ 1.22
CEACAM3-201ENST00000344550 MAGEB2O15479 319 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 GCFC2P16383 781 aaKnown RBP22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 IGFBP4P22692 258 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 KLRC1P26715 233 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 ERVK-21P61565 698 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 ODR4Q5SWX8 454 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 MYOCDQ8IZQ8 938 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 TGS1Q96RS0 853 aaKnown RBP22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 TEKT3Q9BXF9 490 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 DISC1Q9NRI5 854 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 TRPV2Q9Y5S1 764 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 COL4A6Q14031 1691 aa22.65■■□□□ 1.22
CEACAM3-201ENST00000344550 TRANK1O15050 2925 aa22.64■■□□□ 1.22
CEACAM3-201ENST00000344550 IGSF9BQ9UPX0 1349 aa22.64■■□□□ 1.22
CEACAM3-201ENST00000344550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 NEK4P51957 841 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 LRCH2Q5VUJ6 765 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 PPP4R3AQ6IN85 833 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 CKAP2LQ8IYA6 745 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 IL27Q8NEV9 243 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 GTF3C6Q969F1 213 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 CELF4Q9BZC1 486 aaKnown RBP22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 TSPYL2Q9H2G4 693 aaPredicted RBP22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 NRBP2Q9NSY0 501 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 ORC3Q9UBD5 711 aaPredicted RBP22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 SAMM50Q9Y512 469 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 PTPRSQ13332 1948 aa22.64■■□□□ 1.21
CEACAM3-201ENST00000344550 UNC80Q8N2C7 3258 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 CCDC194A0A1B0GVG4 234 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 PSMD10O75832 226 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 GHRP10912 638 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 ATP4AP20648 1035 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 ARNTL2Q8WYA1 636 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 FAM20AQ96MK3 541 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 AIFM3Q96NN9 605 aa22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 FAM49AQ9H0Q0 323 aaPredicted RBP22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
CEACAM3-201ENST00000344550 CUL9Q8IWT3 2517 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 LINC01553A4QN01 128 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 ZBTB42B2RXF5 422 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 CTDNEP1O95476 244 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 ME3Q16798 604 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 B3GNT9Q6UX72 402 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 ATXN2LQ8WWM7 1075 aaKnown RBP22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 OSBPL7Q9BZF2 842 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 BRMS1Q9HCU9 246 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 GABBR1Q9UBS5 961 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 EYSQ5T1H1 3165 aa22.62■■□□□ 1.21
CEACAM3-201ENST00000344550 MYH9P35579 1960 aaKnown RBP22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 LCHNA4D1U4 455 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 DLL1O00548 723 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 TBX3O15119 743 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 NEK8Q86SG6 692 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 KIAA0319LQ8IZA0 1049 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 ETNPPLQ8TBG4 499 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 PRUNE2Q8WUY3 3088 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 TRAPPC12Q8WVT3 735 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 SYMPKQ92797 1274 aaKnown RBP22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 YME1L1Q96TA2 773 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 DDX25Q9UHL0 483 aaKnown RBP22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 KCNJ14Q9UNX9 436 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 MTCH2Q9Y6C9 303 aa22.61■■□□□ 1.21
CEACAM3-201ENST00000344550 ENPP3O14638 875 aa22.6■■□□□ 1.21
CEACAM3-201ENST00000344550 ARHGEF15O94989 841 aa22.6■■□□□ 1.21
CEACAM3-201ENST00000344550 C22orf31O95567 290 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms