RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 ZC4H2Q9NQZ6 224 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 E2F6O75461 281 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 NNMTP40261 264 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 DYRK4Q9NR20 520 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 DDHD2O94830 711 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 GNAT1P11488 350 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 DACH2Q96NX9 599 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 SMAD5Q99717 465 aaKnown RBP13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 EPAS1Q99814 870 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 CAPN10Q9HC96 672 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 NDFIP2Q9NV92 336 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 ADCY9O60503 1353 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 BBOX1O75936 387 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 NDUFA8P51970 172 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 C2orf54Q08AI8 447 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 IFNA8P32881 189 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 HLFQ16534 295 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 OR8K1Q8NGG5 319 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 TRIM58Q8NG06 486 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 TSC1Q92574 1164 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 HOMER3Q9NSC5 361 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 NPHP4O75161 1426 aaPredicted RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 KLC3Q6P597 504 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 SGSM2O43147 1006 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 TUBBP07437 444 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 HMBSP08397 361 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 PLS3P13797 630 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 PPP1R36Q96LQ0 422 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 E5RI56 91 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 CHEK2O96017 543 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ATP8A1Q9Y2Q0 1164 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 SPATA33Q96N06 139 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 CYTH2Q99418 400 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
TRIOBP-202ENST00000344404 LRRD1A4D1F6 860 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 K7ERI5 159 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 RSPH10BP0C881 870 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 PPP2R5BQ15173 497 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 RASEFQ8IZ41 740 aa13.15□□□□□ -0.31
TRIOBP-202ENST00000344404 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 CDC37Q16543 378 aaPredicted RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 SLC26A7Q8TE54 656 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 UBA6A0AVT1 1052 aaPredicted RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 FTCDO95954 541 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 PAN2Q504Q3 1202 aaKnown RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 FCER1AP12319 257 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 PLTPP55058 493 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 PSMC1P62191 440 aaKnown RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 F8W8V4 182 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 ZNF263O14978 683 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 PSMA2P25787 234 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 CCDC195A0A1B0GUA6 201 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 ARIH2O95376 493 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
TRIOBP-202ENST00000344404 SYCE1LA8MT33 242 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms