RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 LRRC53A6NM62 1247 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 TRAF5O00463 557 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 DSG3P32926 999 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 COG2Q14746 738 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 Q4G0T1 1027 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 ARSHQ5FYA8 562 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 POTEGQ6S5H5 508 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 POTEEQ6S8J3 1075 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 LENG9Q96B70 501 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
TPM3-208ENST00000341485 FRMD3A2A2Y4 597 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 SRGAP2O75044 1071 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 EIF4A3P38919 411 aaKnown RBP16.55■□□□□ 0.24
TPM3-208ENST00000341485 RAD51AP2Q09MP3 1159 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 SPA17Q15506 151 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 CCDC40Q4G0X9 1142 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 HERC4Q5GLZ8 1057 aaPredicted RBP16.55■□□□□ 0.24
TPM3-208ENST00000341485 BEND6Q5SZJ8 279 aaPredicted RBP16.55■□□□□ 0.24
TPM3-208ENST00000341485 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 SMCR8Q8TEV9 937 aaPredicted RBP16.55■□□□□ 0.24
TPM3-208ENST00000341485 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 SAR1BQ9Y6B6 198 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 NFIBO00712 420 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 CYP3A4P08684 503 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 KIF11P52732 1056 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 PPATQ06203 517 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 KIF5AQ12840 1032 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 CATSPER3Q86XQ3 398 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 ERO1BQ86YB8 467 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 GPIHBP1Q8IV16 184 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 SCFD1Q8WVM8 642 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 CLEC4DQ8WXI8 215 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 OTUD5Q96G74 571 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 KCTD10Q9H3F6 313 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
TPM3-208ENST00000341485 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 MAP2K7O14733 419 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 TBX3O15119 743 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 LCA5LO95447 670 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 HSD17B4P51659 736 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 PSMC6P62333 389 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 VSNL1P62760 191 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 ZNF771Q7L3S4 317 aaPredicted RBP16.54■□□□□ 0.24
TPM3-208ENST00000341485 WNK4Q96J92 1243 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 MMS19Q96T76 1030 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
TPM3-208ENST00000341485 SPATA31C1P0DKV0 1188 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 CIITAP33076 1130 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 UBXN2AP68543 259 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
TPM3-208ENST00000341485 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
TPM3-208ENST00000341485 IFIH1Q9BYX4 1025 aaKnown RBP16.54■□□□□ 0.24
TPM3-208ENST00000341485 EDEM3Q9BZQ6 932 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 ABCB6Q9NP58 842 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
TPM3-208ENST00000341485 ANO9A1A5B4 782 aa16.53■□□□□ 0.24
TPM3-208ENST00000341485 MEIS1O00470 390 aa16.53■□□□□ 0.24
TPM3-208ENST00000341485 KRT18P05783 430 aaKnown RBP16.53■□□□□ 0.24
TPM3-208ENST00000341485 MARSP56192 900 aaKnown RBP16.53■□□□□ 0.24
TPM3-208ENST00000341485 SMC1AQ14683 1233 aaKnown RBP16.53■□□□□ 0.24
TPM3-208ENST00000341485 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
TPM3-208ENST00000341485 IRF6O14896 467 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 ERLIN1O75477 346 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 NOL4O94818 638 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 RPA1P27694 616 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 OAS2P29728 719 aaKnown RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 OAZ1P54368 228 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 GIT2Q14161 759 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 ASTE1Q2TB18 679 aaPredicted RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 SNRNP48Q6IEG0 339 aaKnown RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 SAMD3Q8N6K7 520 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 ERMNQ8TAM6 284 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 CAPZA3Q96KX2 299 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 DEF6Q9H4E7 631 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 RNF146Q9NTX7 359 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 MAP3K20Q9NYL2 800 aaKnown RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.24
TPM3-208ENST00000341485 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.24
TPM3-208ENST00000341485 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms