RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
DNMT1-201ENST00000340748 CFAP57Q96MR6 1250 aa13.93□□□□□ -0.18
DNMT1-201ENST00000340748 BPIFA3Q9BQP9 254 aa13.93□□□□□ -0.18
DNMT1-201ENST00000340748 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
DNMT1-201ENST00000340748 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 RNF8O76064 485 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 SERPING1P05155 500 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 EPHB4P54760 987 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 SLC12A2P55011 1212 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 RNF180Q86T96 592 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 OSBPL5Q9H0X9 879 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-201ENST00000340748 KLHL14Q9P2G3 628 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 CPA4Q9UI42 421 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 CTNND1O60716 968 aaKnown RBP13.92□□□□□ -0.18
DNMT1-201ENST00000340748 FDX1P10109 184 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 FOXO4P98177 505 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 AP3B2Q13367 1082 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 SCYL2Q6P3W7 929 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 METTL23Q86XA0 190 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 TBC1D10CQ8IV04 446 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 CTAGE3PQ8IX95 158 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PBKQ96KB5 322 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PPP2R3BQ9Y5P8 575 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 NR2E3Q9Y5X4 410 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 MYO1FO00160 1098 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 MMP14P50281 582 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 RCSD1Q6JBY9 416 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 RINT1Q6NUQ1 792 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 OPTNQ96CV9 577 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PLA2G12BQ9BX93 195 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PHLPP1O60346 1717 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 PTPREP23469 700 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 MTERF2Q49AM1 385 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 MAP7D3Q8IWC1 876 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 AIFM3Q96NN9 605 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-201ENST00000340748 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
DNMT1-201ENST00000340748 GOLGA8FQ08AF8 430 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 GOLGA8DPQ0D2H9 430 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 ORC2Q13416 577 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-201ENST00000340748 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-201ENST00000340748 MGARPQ8TDB4 240 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 GCNAQ96QF7 691 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PARVGQ9HBI0 331 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PCDHB4Q9Y5E5 795 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 NEDD4P46934 1319 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 HSPA6P17066 643 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PCK1P35558 622 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-201ENST00000340748 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 ANKRD36BP1Q96IX9 119 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PIDD1Q9HB75 910 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 KCNA4P22459 653 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PPP2R5DQ14738 602 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 CEP170P1Q96L14 293 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 BCAP29Q9UHQ4 241 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 CAPN9O14815 690 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 RAB3IPQ96QF0 476 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-201ENST00000340748 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 JRKLQ9Y4A0 524 aa13.91□□□□□ -0.18
DNMT1-201ENST00000340748 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
DNMT1-201ENST00000340748 GABPAQ06546 454 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 SOWAHDA6NJG2 315 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 F5H6K3 240 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 KLRC3Q07444 240 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 DDR1Q08345 913 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 MESDQ14696 234 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 PPP4R1Q8TF05 950 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 LRRC4BQ9NT99 713 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 ENC1O14682 589 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 NDUFA10O95299 355 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 ACTN1P12814 892 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 MAP7Q14244 749 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.18
DNMT1-201ENST00000340748 SPATA33Q96N06 139 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 NDST4Q9H3R1 872 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 GCNT4Q9P109 453 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 ZNF148Q9UQR1 794 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 SLITRK6Q9H5Y7 841 aa13.9□□□□□ -0.18
DNMT1-201ENST00000340748 UBE2SQ16763 222 aa13.89□□□□□ -0.19
DNMT1-201ENST00000340748 PTPROQ16827 1216 aa13.89□□□□□ -0.19
DNMT1-201ENST00000340748 NBPF9Q3BBW0 867 aa13.89□□□□□ -0.19
DNMT1-201ENST00000340748 TSGA10IPQ3SY00 556 aa13.89□□□□□ -0.19
DNMT1-201ENST00000340748 NOGQ13253 232 aa13.89□□□□□ -0.19
DNMT1-201ENST00000340748 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms