RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-201ENST00000339754 TSC22D3Q99576 134 aa10.24□□□□□ -0.77
NECAP1-201ENST00000339754 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.24□□□□□ -0.77
NECAP1-201ENST00000339754 IRAK4Q9NWZ3 460 aa10.24□□□□□ -0.77
NECAP1-201ENST00000339754 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
NECAP1-201ENST00000339754 STK38LQ9Y2H1 464 aa10.24□□□□□ -0.77
NECAP1-201ENST00000339754 GCLCP48506 637 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 TUBP50607 506 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PDCD2Q16342 344 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 TXNRD1Q16881 649 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 SDR42E1Q8WUS8 393 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 AZI2Q9H6S1 392 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 ZDHHC18Q9NUE0 388 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 TRIM33Q9UPN9 1127 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 USP15Q9Y4E8 981 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 CALML3P27482 149 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PDE6CP51160 858 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 CNGA2Q16280 664 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PTPROQ16827 1216 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 GALNT15Q8N3T1 639 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 FMO2Q99518 471 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PIDD1Q9HB75 910 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 NKX1-2Q9UD57 310 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 STXBP5LQ9Y2K9 1186 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 UTP11Q9Y3A2 253 aaKnown RBP10.23□□□□□ -0.77
NECAP1-201ENST00000339754 ASB3Q9Y575 518 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
NECAP1-201ENST00000339754 GOLGA6L10A0A0M3HER8 536 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 TLDC2A0PJX2 215 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 SMIM24O75264 130 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 WFS1O76024 890 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 NPTXRO95502 500 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 KIF5BP33176 963 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 IFNAR2P48551 515 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 ARID5AQ03989 594 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 TNFAIP8L3Q5GJ75 292 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 COL23A1Q86Y22 540 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-201ENST00000339754 GBP7Q8N8V2 638 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-201ENST00000339754 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-201ENST00000339754 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 ZFAND2BQ8WV99 257 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 FAM210AQ96ND0 272 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 NLRP3Q96P20 1036 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 TRIM51Q9BSJ1 452 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 NSRP1Q9H0G5 558 aaKnown RBP10.22□□□□□ -0.77
NECAP1-201ENST00000339754 NR2E1Q9Y466 385 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 AGTP01019 485 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 FGRP09769 529 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 PMS2P54278 862 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 ATP11AP98196 1134 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 AMPD3Q01432 767 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 SLFN11Q7Z7L1 901 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 GUF1Q8N442 669 aaKnown RBP10.22□□□□□ -0.77
NECAP1-201ENST00000339754 FITM2Q8N6M3 262 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 SYT15Q9BQS2 421 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 TRIM31Q9BZY9 425 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 ZMYND12Q9H0C1 365 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 PCDHA6Q9UN73 950 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 PCDHA8Q9Y5H6 950 aa10.22□□□□□ -0.77
NECAP1-201ENST00000339754 CYP2D7A0A087X1C5 515 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 SNAP23O00161 211 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 LAD1O00515 517 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 ABLIM1O14639 778 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 RGS16O15492 202 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 GJB6O95452 261 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 LACTBP83111 547 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 LRRC63Q05C16 580 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 KLRC3Q07444 240 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 PUM3Q15397 648 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 INF2Q27J81 1249 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 C6orf118Q5T5N4 469 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 UBAP2Q5T6F2 1119 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 DUPD1Q68J44 220 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 DNAAF5Q86Y56 855 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 TEKT4Q8WW24 435 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 UTP4Q969X6 686 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 AK8Q96MA6 479 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 MMTAG2Q9BU76 263 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 LSM14BQ9BX40 385 aaKnown RBP10.21□□□□□ -0.77
NECAP1-201ENST00000339754 TANGO6Q9C0B7 1094 aa10.21□□□□□ -0.77
NECAP1-201ENST00000339754 PRKAG3Q9UGI9 489 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms