RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 ADAM17P78536 824 aa27.87■■■□□ 2.05
FAM78B-201ENST00000338353 TTC38Q5R3I4 469 aa27.87■■■□□ 2.05
FAM78B-201ENST00000338353 CAGE1Q8TC20 777 aa27.87■■■□□ 2.05
FAM78B-201ENST00000338353 ATP4AP20648 1035 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 PPP2R5CQ13362 524 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 NBR1Q14596 966 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 RDM1Q8NG50 284 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 ATP8B4Q8TF62 1192 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 IGSF9BQ9UPX0 1349 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 EML1O00423 815 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 TRAPPC10P48553 1259 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 PPIGQ13427 754 aaKnown RBP eCLIP27.86■■■□□ 2.05
FAM78B-201ENST00000338353 UGCGQ16739 394 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 CLEC17AQ6ZS10 378 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 TRAPPC12Q8WVT3 735 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 TMEM60Q9H2L4 133 aa27.86■■■□□ 2.05
FAM78B-201ENST00000338353 SCN5AQ14524 2016 aa27.85■■■□□ 2.05
FAM78B-201ENST00000338353 CKBP12277 381 aa27.85■■■□□ 2.05
FAM78B-201ENST00000338353 TRIM71Q2Q1W2 868 aaKnown RBP27.85■■■□□ 2.05
FAM78B-201ENST00000338353 ZBTB10Q96DT7 871 aa27.85■■■□□ 2.05
FAM78B-201ENST00000338353 TUBE1Q9UJT0 475 aa27.85■■■□□ 2.05
FAM78B-201ENST00000338353 RRN3P2A6NIE6 340 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 HBP1O60381 514 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 IQCF3P0C7M6 154 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 ACRP10323 421 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 TXKP42681 527 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 TOB1P50616 345 aaPredicted RBP27.84■■■□□ 2.05
FAM78B-201ENST00000338353 MARCH8Q5T0T0 291 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 NCAPH2Q6IBW4 605 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 MTMR9Q96QG7 549 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 PCDHA12Q9UN75 941 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 TANC1Q9C0D5 1861 aa27.84■■■□□ 2.05
FAM78B-201ENST00000338353 ZNF862O60290 1169 aa27.83■■■□□ 2.05
FAM78B-201ENST00000338353 THPOP40225 353 aa27.83■■■□□ 2.05
FAM78B-201ENST00000338353 TDHQ8IZJ6 230 aa27.83■■■□□ 2.05
FAM78B-201ENST00000338353 TTC12Q9H892 705 aaPredicted RBP27.83■■■□□ 2.05
FAM78B-201ENST00000338353 SELPP16109 830 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 PRKCEQ02156 737 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 RBL2Q08999 1139 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 SPIRE1Q08AE8 756 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 C9orf50Q5SZB4 431 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 RUFY4Q6ZNE9 571 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 LRRC8DQ7L1W4 858 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 BANK1Q8NDB2 785 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 BBXQ8WY36 941 aaPredicted RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 GBP4Q96PP9 640 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 PCDHB6Q9Y5E3 794 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 MBLAC1A4D2B0 266 aaPredicted RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 ORC2Q13416 577 aaPredicted RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 SHHQ15465 462 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 FOXD4L6Q3SYB3 417 aaPredicted RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 HABP4Q5JVS0 413 aaKnown RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 ZNF618Q5T7W0 954 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 FOXD4L3Q6VB84 417 aaPredicted RBP27.82■■■□□ 2.04
FAM78B-201ENST00000338353 C16orf59Q7L2K0 433 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 DEFB128Q7Z7B8 93 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 IL23AQ9NPF7 189 aa27.82■■■□□ 2.04
FAM78B-201ENST00000338353 FAM173BQ6P4H8 233 aa27.81■■■□□ 2.04
FAM78B-201ENST00000338353 FAM167AQ96KS9 214 aa27.81■■■□□ 2.04
FAM78B-201ENST00000338353 A0A1W2PPC1 479 aa27.8■■■□□ 2.04
FAM78B-201ENST00000338353 OATP04181 439 aa27.8■■■□□ 2.04
FAM78B-201ENST00000338353 OR52Z1P0C646 297 aa27.8■■■□□ 2.04
FAM78B-201ENST00000338353 ZNF484Q5JVG2 852 aa27.8■■■□□ 2.04
FAM78B-201ENST00000338353 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.8■■■□□ 2.04
FAM78B-201ENST00000338353 ZBTB42B2RXF5 422 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 CTSHP09668 335 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 DNM1Q05193 864 aaKnown RBP27.79■■■□□ 2.04
FAM78B-201ENST00000338353 EPHA7Q15375 998 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 TAF2Q6P1X5 1199 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 NRBP2Q9NSY0 501 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 COL1A2P08123 1366 aa27.79■■■□□ 2.04
FAM78B-201ENST00000338353 KLRC1P26715 233 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 PSMC5P62195 406 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 RILPL1Q5EBL4 403 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 TMEM240Q5SV17 173 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 ATL3Q6DD88 541 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 MTHFD1LQ6UB35 978 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 ZNF365Q70YC5 407 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 RPUSD2Q8IZ73 545 aaKnown RBP27.78■■■□□ 2.04
FAM78B-201ENST00000338353 TET1Q8NFU7 2136 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 DNAJB3Q8WWF6 145 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 VWCEQ96DN2 955 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 ZNF396Q96N95 335 aaPredicted RBP27.78■■■□□ 2.04
FAM78B-201ENST00000338353 FAM49AQ9H0Q0 323 aaPredicted RBP27.78■■■□□ 2.04
FAM78B-201ENST00000338353 EVPLQ92817 2033 aa27.78■■■□□ 2.04
FAM78B-201ENST00000338353 RBAK-RBAKDNI3L0D1 243 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 RFC2P35250 354 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 TRAF7Q6Q0C0 670 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 CHAMP1Q96JM3 812 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 RGL1Q9NZL6 768 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 POTEMA6NI47 508 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 RSPH10B2B2RC85 870 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 P4HBP07237 508 aaKnown RBP27.77■■■□□ 2.04
FAM78B-201ENST00000338353 RSPH10BP0C881 870 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 QARSP47897 775 aaKnown RBP27.77■■■□□ 2.04
FAM78B-201ENST00000338353 KRT85P78386 507 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 PTGDRQ13258 359 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 PSRC1Q6PGN9 363 aaPredicted RBP27.77■■■□□ 2.04
FAM78B-201ENST00000338353 C4orf32Q8N8J7 132 aa27.77■■■□□ 2.04
FAM78B-201ENST00000338353 DYDC2Q96IM9 177 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms