RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZKSCAN8Q15776 578 aaPredicted RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 GOLGA5Q8TBA6 731 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 LRRC15Q8TF66 581 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 KIFC3Q9BVG8 833 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 SNX12Q9UMY4 172 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 EIF4E1BA6NMX2 242 aaKnown RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 TISP43B9A030 160 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 GCOM1H8Y6P7 765 aaPredicted RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 LAD1O00515 517 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 DAPK3O43293 454 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 ZRANB2O95218 330 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-201ENST00000336873 AFPP02771 609 aaKnown RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 MYZAPP0CAP1 466 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 TMOD1P28289 359 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 OSTNP61366 133 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 MIER3Q7Z3K6 550 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 SH3RF1Q7Z6J0 888 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 CATSPER3Q86XQ3 398 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 CCDC170Q8IYT3 715 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 EXOC4Q96A65 974 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 CABS1Q96KC9 395 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 HEMGNQ9BXL5 484 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 ZNF277Q9NRM2 450 aaPredicted RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 PI4KBQ9UBF8 816 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 CCPG1Q9ULG6 757 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 PEX3P56589 373 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 DGKZQ13574 1117 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 SEPT7Q16181 437 aaKnown RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 UAP1Q16222 522 aaPredicted RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 SBK1Q52WX2 424 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 FAM182AQ5T1J6 154 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 PASD1Q8IV76 773 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 PLCB1Q9NQ66 1216 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 BLOC1S4Q9NUP1 217 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 STK32BQ9NY57 414 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 AMFRQ9UKV5 643 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 UTP11Q9Y3A2 253 aaKnown RBP8.97□□□□□ -0.97
HPS4-201ENST00000336873 EIF3CLB5ME19 914 aaKnown RBP8.96□□□□□ -0.97
HPS4-201ENST00000336873 KLRC4O43908 158 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 NDUFB10O96000 172 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 PDE6BP35913 854 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 PPFIA1Q13136 1202 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 SYCP2LQ5T4T6 812 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 C16orf86Q6ZW13 317 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 PNMA5Q96PV4 448 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 EIF3CQ99613 913 aaKnown RBP8.96□□□□□ -0.97
HPS4-201ENST00000336873 TRIM51Q9BSJ1 452 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 STK17AQ9UEE5 414 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.97
HPS4-201ENST00000336873 AFDNP55196 1824 aaKnown RBP8.96□□□□□ -0.97
HPS4-201ENST00000336873 NR3C1P04150 777 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 GLI1P08151 1106 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 FAM153BP0C7A2 387 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 CALRP27797 417 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 KCNJ1P48048 391 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 SOX10P56693 466 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 IFI16Q16666 785 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 FAM153CQ494X1 144 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 GUF1Q8N442 669 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 SLC30A5Q8TAD4 765 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 HAUS1Q96CS2 278 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 BTBD6Q96KE9 485 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 OSGEPQ9NPF4 335 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 ANKFY1Q9P2R3 1169 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 FAM153AQ9UHL3 310 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 DNAJC12Q9UKB3 198 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 FRMD3A2A2Y4 597 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 ZNF263O14978 683 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 POLR2MP0CAP2 368 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 GYS1P13807 737 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 MYH10P35580 1976 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 STAT2P52630 851 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 SYDE2Q5VT97 1194 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 CCNI2Q6ZMN8 369 aaPredicted RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 GLG1Q92896 1179 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 SPZ1Q9BXG8 430 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 DHX36Q9H2U1 1008 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 RAVER2Q9HCJ3 691 aaKnown RBP8.96□□□□□ -0.98
HPS4-201ENST00000336873 SH3GLB2Q9NR46 395 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 SALL4Q9UJQ4 1053 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 PLAAQ9Y263 795 aa8.96□□□□□ -0.98
HPS4-201ENST00000336873 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 SERPING1P05155 500 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 RXRBP28702 533 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 KCNJ6P48051 423 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 LRRC63Q05C16 580 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 KCNB1Q14721 858 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 E2F5Q15329 346 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 FBXW10Q5XX13 1052 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 CYFIP1Q7L576 1253 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 APTXQ7Z2E3 356 aaKnown RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 MMTAG2Q9BU76 263 aaKnown RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 GPRC5CQ9NQ84 441 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms