RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 KRT2P35908 639 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 DEFB103AP81534 67 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 MGAT3Q09327 533 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
KATNA1-201ENST00000335643 LRCH2Q5VUJ6 765 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 KRT40Q6A162 431 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 PDXDC2PQ6P474 469 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 MOXD1Q6UVY6 613 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
KATNA1-201ENST00000335643 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
KATNA1-201ENST00000335643 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 ATP8B4Q8TF62 1192 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 RIT2Q99578 217 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 NKX2-4Q9H2Z4 354 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 GABBR1Q9UBS5 961 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
KATNA1-201ENST00000335643 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
KATNA1-201ENST00000335643 IGSF9BQ9UPX0 1349 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 ZNF862O60290 1169 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 GAS7O60861 476 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 CAND2O75155 1236 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 PARNO95453 639 aaKnown RBP16.87■□□□□ 0.29
KATNA1-201ENST00000335643 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 GRIN2CQ14957 1233 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 PLEKHG4Q58EX7 1191 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 FAM26DQ5JW98 314 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 FAM160B1Q5W0V3 765 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 CDX2Q99626 313 aaPredicted RBP16.87■□□□□ 0.29
KATNA1-201ENST00000335643 FAM49AQ9H0Q0 323 aaPredicted RBP16.87■□□□□ 0.29
KATNA1-201ENST00000335643 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 SAMM50Q9Y512 469 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 EVPLQ92817 2033 aa16.87■□□□□ 0.29
KATNA1-201ENST00000335643 BAIAP3O94812 1187 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 SLC26A2P50443 739 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 TMEM62Q0P6H9 643 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
KATNA1-201ENST00000335643 RPAINQ86UA6 219 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
KATNA1-201ENST00000335643 TBC1D32Q96NH3 1257 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 TEKT3Q9BXF9 490 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 ZNF576Q9H609 170 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 KCNMB3Q9NPA1 279 aa16.86■□□□□ 0.29
KATNA1-201ENST00000335643 RRN3P2A6NIE6 340 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
KATNA1-201ENST00000335643 PSAPP07602 524 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 RABEP1Q15276 862 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 PPP4R3AQ6IN85 833 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 HAS1Q92839 578 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 ZSCAN31Q96LW9 406 aaPredicted RBP16.85■□□□□ 0.29
KATNA1-201ENST00000335643 SLC9A7Q96T83 725 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 VAV3Q9UKW4 847 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 EML1O00423 815 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 HBP1O60381 514 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 KLRC1P26715 233 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 SPRED2Q7Z698 418 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 HERC6Q8IVU3 1022 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
KATNA1-201ENST00000335643 CDY2AQ9Y6F7 541 aa16.85■□□□□ 0.29
KATNA1-201ENST00000335643 TMEM150BA6NC51 233 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 C22orf31O95567 290 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 GHRP10912 638 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 LPIN1Q14693 890 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 RAB30Q15771 203 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
KATNA1-201ENST00000335643 SH2B1Q9NRF2 756 aaPredicted RBP16.84■□□□□ 0.29
KATNA1-201ENST00000335643 TCEAL9Q9UHQ7 104 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 MSRAQ9UJ68 235 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 PCDHA11Q9Y5I1 949 aa16.84■□□□□ 0.29
KATNA1-201ENST00000335643 ABHD14A-ACY1A0A1B0GW23 586 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.83■□□□□ 0.28
KATNA1-201ENST00000335643 LCHNA4D1U4 455 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 CA3P07451 260 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 KCNJ6P48051 423 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 MRPS6P82932 125 aaKnown RBP16.83■□□□□ 0.28
KATNA1-201ENST00000335643 PRKCEQ02156 737 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 IKBKEQ14164 716 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 MIER3Q7Z3K6 550 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 PHOSPHO2Q8TCD6 241 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.28
KATNA1-201ENST00000335643 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
KATNA1-201ENST00000335643 COL1A2P08123 1366 aa16.83■□□□□ 0.28
KATNA1-201ENST00000335643 SMIM35A0A1B0GVV1 85 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 STBD1O95210 358 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 OATP04181 439 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 GCFC2P16383 781 aaKnown RBP16.82■□□□□ 0.28
KATNA1-201ENST00000335643 SFNP31947 248 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 JAK3P52333 1124 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 TRIM29Q14134 588 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms