RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PIGOQ8TEQ8 1089 aa19.45■□□□□ 0.7
LRCH3-201ENST00000334859 HDAC7Q8WUI4 952 aa19.45■□□□□ 0.7
LRCH3-201ENST00000334859 CNKSR1Q969H4 720 aa19.45■□□□□ 0.7
LRCH3-201ENST00000334859 LRRC1Q9BTT6 524 aa19.45■□□□□ 0.7
LRCH3-201ENST00000334859 POLR3CQ9BUI4 534 aaPredicted RBP19.45■□□□□ 0.7
LRCH3-201ENST00000334859 BCAS3Q9H6U6 928 aa19.45■□□□□ 0.7
LRCH3-201ENST00000334859 PIK3CDO00329 1044 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 PALMO75781 387 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 EYA4O95677 639 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 NR3C1P04150 777 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 CYP3A4P08684 503 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 SLC9A1P19634 815 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 CTTNQ14247 550 aaKnown RBP19.44■□□□□ 0.7
LRCH3-201ENST00000334859 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 TYW1Q9NV66 732 aaKnown RBP19.44■□□□□ 0.7
LRCH3-201ENST00000334859 AIPL1Q9NZN9 384 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 CALCOCO1Q9P1Z2 691 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 TSKSQ9UJT2 592 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 ASTN1O14525 1302 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 AKAP3O75969 853 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 FTCDO95954 541 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 UBXN2AP68543 259 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 NAB2Q15742 525 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 EXOC3L4Q17RC7 722 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 LRCH2Q5VUJ6 765 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 PACSIN1Q9BY11 444 aa19.44■□□□□ 0.7
LRCH3-201ENST00000334859 HERC5Q9UII4 1024 aaKnown RBP19.44■□□□□ 0.7
LRCH3-201ENST00000334859 SFI1A8K8P3 1242 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 YDJCA8MPS7 323 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 EPB41P11171 864 aaKnown RBP19.43■□□□□ 0.7
LRCH3-201ENST00000334859 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
LRCH3-201ENST00000334859 KLRC1P26715 233 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 SLC7A5Q01650 507 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 KIAA1755Q5JYT7 1200 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 TPH2Q8IWU9 490 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 PSD3Q9NYI0 1048 aa19.43■□□□□ 0.7
LRCH3-201ENST00000334859 COL2A1P02458 1487 aaPredicted RBP19.43■□□□□ 0.7
LRCH3-201ENST00000334859 CLIC2O15247 247 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 RNF40O75150 1001 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 FAM13AO94988 1023 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 UCHL3P15374 230 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 AARSP49588 968 aaKnown RBP eCLIP19.42■□□□□ 0.7
LRCH3-201ENST00000334859 KCNA1Q09470 495 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 MS4A14Q96JA4 679 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 GOPCQ9HD26 462 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 DMGDHQ9UI17 866 aaKnown RBP19.42■□□□□ 0.7
LRCH3-201ENST00000334859 CASP4P49662 377 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 HNRNPH2P55795 449 aaKnown RBP19.42■□□□□ 0.7
LRCH3-201ENST00000334859 PTK2Q05397 1052 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
LRCH3-201ENST00000334859 BMT2Q1RMZ1 405 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 CFAP221Q4G0U5 840 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 C8orf74Q6P047 294 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 FAM204AQ9H8W3 233 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 PLCB1Q9NQ66 1216 aa19.42■□□□□ 0.7
LRCH3-201ENST00000334859 RBM12Q9NTZ6 932 aaKnown RBP19.42■□□□□ 0.7
LRCH3-201ENST00000334859 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-201ENST00000334859 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 PON1P27169 355 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 TRAF1Q13077 416 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 RINT1Q6NUQ1 792 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 DYDC2Q96IM9 177 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 PCDHB13Q9Y5F0 798 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 SLC16A3O15427 465 aaKnown RBP19.41■□□□□ 0.7
LRCH3-201ENST00000334859 CAPN2P17655 700 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 GAP43P17677 238 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 MYCT1Q8N699 235 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 AENQ8WTP8 325 aaKnown RBP19.41■□□□□ 0.7
LRCH3-201ENST00000334859 ZFP91Q96JP5 570 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-201ENST00000334859 METTL14Q9HCE5 456 aaKnown RBP19.41■□□□□ 0.7
LRCH3-201ENST00000334859 OLFML3Q9NRN5 406 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 GCNT4Q9P109 453 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 STIM2Q9P246 746 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 SYNPO2Q9UMS6 1093 aa19.41■□□□□ 0.7
LRCH3-201ENST00000334859 KIF13BQ9NQT8 1826 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 GAS7O60861 476 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 OTOP1Q7RTM1 612 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 GOLGA6L1Q8N7Z2 621 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 ZBTB21Q9ULJ3 1066 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 PACSIN2Q9UNF0 486 aaPredicted RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 TMX2Q9Y320 296 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 PCDHGC5Q9Y5F6 944 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 C21orf2O43822 256 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 SYF2O95926 243 aaKnown RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 NMT1P30419 496 aaKnown RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 EPHA7Q15375 998 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 ZSCAN26Q16670 478 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 SND1Q7KZF4 910 aaKnown RBP eCLIP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 ZNF571Q7Z3V5 609 aaPredicted RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 SUPT20HQ8NEM7 779 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 RIN2Q8WYP3 895 aaPredicted RBP19.4■□□□□ 0.7
LRCH3-201ENST00000334859 RUBCNQ92622 972 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms