RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PARVGQ9HBI0 331 aa9.98□□□□□ -0.81
SIMC1-201ENST00000332772 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
SIMC1-201ENST00000332772 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
SIMC1-201ENST00000332772 CGNQ9P2M7 1197 aaKnown RBP9.98□□□□□ -0.81
SIMC1-201ENST00000332772 DNAI1Q9UI46 699 aa9.98□□□□□ -0.81
SIMC1-201ENST00000332772 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
SIMC1-201ENST00000332772 SSC5DA1L4H1 1573 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 POLR2AP24928 1970 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 MYH11P35749 1972 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 PTPRFP10586 1907 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 RASSF10A6NK89 507 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 RNF225M0QZC1 329 aaPredicted RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 KIF5CO60282 957 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 NDUFA10O95299 355 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 CCND2P30279 289 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 QARSP47897 775 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 HIRAP54198 1017 aaPredicted RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 CYP4A11Q02928 519 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 CTTNQ14247 550 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 NLRX1Q86UT6 975 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 C4orf19Q8IY42 314 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 TXLNBQ8N3L3 684 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 ZKSCAN4Q969J2 545 aaPredicted RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 ATG4CQ96DT6 458 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 TAAR1Q96RJ0 339 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 LXNQ9BS40 222 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 HAUS4Q9H6D7 363 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 TCEAL9Q9UHQ7 104 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 ZNF214Q9UL59 606 aaPredicted RBP9.97□□□□□ -0.81
SIMC1-201ENST00000332772 PCDHB13Q9Y5F0 798 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 A0A0G2JMZ2 1700 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 NFASCO94856 1347 aa9.97□□□□□ -0.81
SIMC1-201ENST00000332772 NPHP3-ACAD11A0A0J9YXS1 232 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 PPP1R12BO60237 982 aaPredicted RBP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 USP2O75604 605 aaPredicted RBP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 CASQ1P31415 396 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 EPS15P42566 896 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ARHGEF16Q5VV41 709 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 WDR59Q6PJI9 974 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 GLIS3Q8NEA6 775 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ANKRD7Q92527 254 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 IWS1Q96ST2 819 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ST6GALNAC4Q9H4F1 302 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ACAD9Q9H845 621 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 MRPL44Q9H9J2 332 aaKnown RBP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ANKEF1Q9NU02 776 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 CEP72Q9P209 647 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 MYO6Q9UM54 1294 aa9.96□□□□□ -0.81
SIMC1-201ENST00000332772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.96□□□□□ -0.81
SIMC1-201ENST00000332772 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 ARHGEF35A5YM69 484 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 LCA5LO95447 670 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 NR2F2P24468 414 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 HMGCS2P54868 508 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 GNG11P61952 73 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 PSMC5P62195 406 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 MTF1Q14872 753 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 LBX2Q6XYB7 198 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 ZNF720Q7Z2F6 126 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 SMAP1Q8IYB5 467 aaPredicted RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 DNERQ8NFT8 737 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 NEK11Q8NG66 645 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 INPP4AQ96PE3 977 aaPredicted RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 STRA6Q9BX79 667 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 PLCB1Q9NQ66 1216 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 LARSQ9P2J5 1176 aaKnown RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 ARMCX3Q9UH62 379 aaPredicted RBP9.96□□□□□ -0.82
SIMC1-201ENST00000332772 FBXO40Q9UH90 709 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 FBXL5Q9UKA1 691 aa9.96□□□□□ -0.82
SIMC1-201ENST00000332772 WDR81Q562E7 1941 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 SSU72P8A0A1W2PR75 194 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 CHMP2AO43633 222 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 NR3C2P08235 984 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 SCP2P22307 547 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 ABCD1P33897 745 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 HOXD13P35453 343 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 UBXN2AP68543 259 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 ITGB3BPQ13352 177 aaPredicted RBP9.95□□□□□ -0.82
SIMC1-201ENST00000332772 BAATQ14032 418 aaPredicted RBP9.95□□□□□ -0.82
SIMC1-201ENST00000332772 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
SIMC1-201ENST00000332772 SLC30A10Q6XR72 485 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
SIMC1-201ENST00000332772 NELFCDQ8IXH7 590 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms