RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KRBA1A5PL33 1030 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 M0R2C6 588 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 ATAT1Q5SQI0 421 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 RARS2Q5T160 578 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 ACSF2Q96CM8 615 aaPredicted RBP17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 NAPBQ9H115 298 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 ZNF215Q9UL58 517 aaPredicted RBP17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 CDY2AQ9Y6F7 541 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 NRCAMQ92823 1304 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 HMMRO75330 724 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 TRIM50Q86XT4 487 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 TBC1D17Q9HA65 648 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 KCNK12Q9HB15 430 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 HCSTQ9UBK5 93 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 WNT16Q9UBV4 365 aa17.21■□□□□ 0.35
CTHRC1-201ENST00000330295 SPTLC1O15269 473 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 NARSO43776 548 aaKnown RBP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 DCNP07585 359 aaKnown RBP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 C12orf76Q8N812 135 aaPredicted RBP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 DNAJB3Q8WWF6 145 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 PDCD2LQ9BRP1 358 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 DLGAP2Q9P1A6 1054 aa17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 SETXQ7Z333 2677 aaKnown RBP17.2■□□□□ 0.34
CTHRC1-201ENST00000330295 TBKBP1A7MCY6 615 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 CFHP08603 1231 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 TYW1Q9NV66 732 aaKnown RBP17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 USP18Q9UMW8 372 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 ASPMQ8IZT6 3477 aa17.19■□□□□ 0.34
CTHRC1-201ENST00000330295 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 LAG3P18627 525 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 SARSP49591 514 aaKnown RBP17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 MRPS6P82932 125 aaKnown RBP17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 VSIG10LQ86VR7 867 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 PADI3Q9ULW8 664 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 CA14Q9ULX7 337 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 SIT1Q9Y3P8 196 aa17.18■□□□□ 0.34
CTHRC1-201ENST00000330295 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 POTEMA6NI47 508 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 CLASP2O75122 1294 aaKnown RBP17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 CFBP00751 764 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 TGM1P22735 817 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 KANK3Q6NY19 840 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 POTEGQ6S5H5 508 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 MAML2Q8IZL2 1156 aaPredicted RBP17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 GPR20Q99678 358 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 CPVLQ9H3G5 476 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 CWH43Q9H720 699 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 ZBTB40Q9NUA8 1239 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 IGSF9Q9P2J2 1179 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 MRPL11Q9Y3B7 192 aaKnown RBP17.17■□□□□ 0.34
CTHRC1-201ENST00000330295 DOCK5Q9H7D0 1870 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 MYH6P13533 1939 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 PAK2Q13177 524 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 SMC1AQ14683 1233 aaKnown RBP17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 PGM5Q15124 567 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 ZNF528Q3MIS6 628 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 FAM102BQ5T8I3 360 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 PHLDB3Q6NSJ2 640 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 CCDC149Q6ZUS6 474 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 MRPL43Q8N983 215 aaKnown RBP17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 IL31RAQ8NI17 732 aa17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 SMG5Q9UPR3 1016 aaKnown RBP17.16■□□□□ 0.34
CTHRC1-201ENST00000330295 ORC4O43929 436 aa17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 HSD17B4P51659 736 aa17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 CYFIP1Q7L576 1253 aa17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 ZFP91Q96JP5 570 aaPredicted RBP17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
CTHRC1-201ENST00000330295 TMX1Q9H3N1 280 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms