RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 FAM133AQ8N9E0 248 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 HES6Q96HZ4 224 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.29□□□□□ -0.44
GINS3-202ENST00000328514 RAB17Q9H0T7 212 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 ADAM7Q9H2U9 754 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 EPB41L4BQ9H329 900 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 AMACRQ9UHK6 382 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 TRAF5O00463 557 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 CYP2D6P10635 497 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 MECOMQ03112 1051 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 TMEM266Q2M3C6 531 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 ZNF571Q7Z3V5 609 aaPredicted RBP12.28□□□□□ -0.44
GINS3-202ENST00000328514 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 CDK5RAP3Q96JB5 506 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
GINS3-202ENST00000328514 FMO2Q99518 471 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 AP1M1Q9BXS5 423 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 PABPC3Q9H361 631 aaKnown RBP12.28□□□□□ -0.44
GINS3-202ENST00000328514 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
GINS3-202ENST00000328514 CNOT7Q9UIV1 285 aaKnown RBP12.28□□□□□ -0.44
GINS3-202ENST00000328514 SMCO2A6NFE2 343 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 CCDC169A6NNP5 214 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 BACH1O14867 736 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 LIN7AO14910 233 aaPredicted RBP12.27□□□□□ -0.44
GINS3-202ENST00000328514 TTI1O43156 1089 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 FLOT1O75955 427 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 NTSR2O95665 410 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 CHN1P15882 459 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 NAPAP54920 295 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 PTENP60484 403 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 ICA1Q05084 483 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 COASYQ13057 564 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 EDRF1Q3B7T1 1238 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 ACCSLQ4AC99 568 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 TNFAIP8L3Q5GJ75 292 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 DUPD1Q68J44 220 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 NT5DC3Q86UY8 548 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.44
GINS3-202ENST00000328514 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.44
GINS3-202ENST00000328514 TBCKQ8TEA7 893 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 PCDHA2Q9Y5H9 948 aa12.27□□□□□ -0.44
GINS3-202ENST00000328514 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
GINS3-202ENST00000328514 CAND2O75155 1236 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 NEBLO76041 1014 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 GFPT2O94808 682 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 AGTP01019 485 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 MMEP08473 750 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 ITGA4P13612 1032 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 TXKP42681 527 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 ZNF131P52739 623 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
GINS3-202ENST00000328514 CLUL1Q15846 466 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 CALCRLQ16602 461 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 HYIQ5T013 277 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 ALKBH5Q6P6C2 394 aaKnown RBP12.27□□□□□ -0.45
GINS3-202ENST00000328514 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 PEX26Q7Z412 305 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 MDM1Q8TC05 714 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 ANKRD27Q96NW4 1050 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 KCTD10Q9H3F6 313 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 BSDC1Q9NW68 430 aaPredicted RBP12.27□□□□□ -0.45
GINS3-202ENST00000328514 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
GINS3-202ENST00000328514 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 SLC26A4O43511 780 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
GINS3-202ENST00000328514 GBP1P32455 592 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 CCNG1P51959 295 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 LMNB2Q03252 620 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 PPP2R5AQ15172 486 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 LRRC41Q15345 812 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 GALNTL6Q49A17 601 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 KRT79Q5XKE5 535 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 REXO1Q8N1G1 1221 aaKnown RBP12.26□□□□□ -0.45
GINS3-202ENST00000328514 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
GINS3-202ENST00000328514 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 STAMBPL1Q96FJ0 436 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 ERP44Q9BS26 406 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
GINS3-202ENST00000328514 NOP53Q9NZM5 478 aaKnown RBP12.26□□□□□ -0.45
GINS3-202ENST00000328514 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms