RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 CEP57Q86XR8 500 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 U2AF1L4Q8WU68 220 aaKnown RBP15.93■□□□□ 0.14
SSBP3-201ENST00000326956 HAS1Q92839 578 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 NAP1L4Q99733 375 aaKnown RBP15.93■□□□□ 0.14
SSBP3-201ENST00000326956 RTFDC1Q9BY42 306 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-201ENST00000326956 NEUROG2Q9H2A3 272 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 GOPCQ9HD26 462 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 AMFRQ9UKV5 643 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 NFS1Q9Y697 457 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 BACH1O14867 736 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 TTI1O43156 1089 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 KCNQ4P56696 695 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 CCDC50Q8IVM0 306 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-201ENST00000326956 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 RAPGEF5Q92565 580 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 KCTD10Q9H3F6 313 aa15.93■□□□□ 0.14
SSBP3-201ENST00000326956 MAST2Q6P0Q8 1798 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 ITGA4P13612 1032 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-201ENST00000326956 LRRC57Q8N9N7 239 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 PSMD1Q99460 953 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 ATP8A1Q9Y2Q0 1164 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 MYH4Q9Y623 1939 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 SNED1Q8TER0 1413 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 CALUO43852 315 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-201ENST00000326956 CYP11B2P19099 503 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 NEDD9Q14511 834 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 PPP1R18Q6NYC8 613 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 RAB17Q9H0T7 212 aa15.92■□□□□ 0.14
SSBP3-201ENST00000326956 SUCLA2Q9P2R7 463 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-201ENST00000326956 RASSF9O75901 435 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 NF2P35240 595 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 FLT3P36888 993 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 TMC3Q7Z5M5 1100 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 HOOK3Q86VS8 718 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 ZKSCAN4Q969J2 545 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 SCLT1Q96NL6 688 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 FMO2Q99518 471 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 CNOT10Q9H9A5 744 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 GOLGA6L10A0A0M3HER8 536 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 PON1P27169 355 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 EIF3BP55884 814 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 QPCTQ16769 361 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 RPAINQ86UA6 219 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 SLF2Q8IX21 1173 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 PARP9Q8IXQ6 854 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 MTMR4Q9NYA4 1195 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 EDIL3O43854 480 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 FGGP02679 453 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 RPL13P26373 211 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 ANXA13P27216 316 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 KNOP1Q1ED39 458 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 HYIQ5T013 277 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 ADGRF4Q8IZF3 695 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 GPR101Q96P66 508 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 PCDHA2Q9Y5H9 948 aa15.91■□□□□ 0.14
SSBP3-201ENST00000326956 ZNF335Q9H4Z2 1342 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-201ENST00000326956 PHF20L1A8MW92 1017 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 KCNQ2O43526 872 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 RAD21O60216 631 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 ANKRD20A8PQ5CZ79 823 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 TACO1Q9BSH4 297 aaKnown RBP15.9■□□□□ 0.14
SSBP3-201ENST00000326956 OSBPL7Q9BZF2 842 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 METTL14Q9HCE5 456 aaKnown RBP15.9■□□□□ 0.14
SSBP3-201ENST00000326956 GPR75-ASB3A0A0A6YYF3 556 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 F8VZ95 297 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 CTNND1O60716 968 aaKnown RBP15.9■□□□□ 0.14
SSBP3-201ENST00000326956 EZRP15311 586 aaKnown RBP15.9■□□□□ 0.14
SSBP3-201ENST00000326956 PICALMQ13492 652 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 CYB5D1Q6P9G0 228 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 ANKS4BQ8N8V4 417 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 ERMNQ8TAM6 284 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 P3H4Q92791 437 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 SELENOSQ9BQE4 189 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 DHX36Q9H2U1 1008 aaKnown RBP15.9■□□□□ 0.14
SSBP3-201ENST00000326956 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 HAUS2Q9NVX0 235 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 GCNT4Q9P109 453 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 PITPNM2Q9BZ72 1349 aa15.9■□□□□ 0.14
SSBP3-201ENST00000326956 TLDC2A0PJX2 215 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 FERP16591 822 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 PRKCIP41743 596 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 STAT1P42224 750 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 KCTD19Q17RG1 926 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-201ENST00000326956 SGSM3Q96HU1 749 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 NAP1L3Q99457 506 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-201ENST00000326956 DNM3Q9UQ16 869 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 A0A0A6YYK5 440 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-201ENST00000326956 POTEFA5A3E0 1075 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 GFPT2O94808 682 aa15.89■□□□□ 0.13
SSBP3-201ENST00000326956 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms