RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 NIM1KQ8IY84 436 aa23.55■■□□□ 1.36
LIMS2-201ENST00000324938 PIGOQ8TEQ8 1089 aa23.55■■□□□ 1.36
LIMS2-201ENST00000324938 GLIS2Q9BZE0 524 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-201ENST00000324938 AIPL1Q9NZN9 384 aa23.55■■□□□ 1.36
LIMS2-201ENST00000324938 FRMPD4Q14CM0 1322 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 CHMP2AO43633 222 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 AFPP02771 609 aaKnown RBP23.54■■□□□ 1.36
LIMS2-201ENST00000324938 NR3C1P04150 777 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 PRLRP16471 622 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 RPL13P26373 211 aaKnown RBP23.54■■□□□ 1.36
LIMS2-201ENST00000324938 UBXN2AP68543 259 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 APBA1Q02410 837 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 SMC1AQ14683 1233 aaKnown RBP23.54■■□□□ 1.36
LIMS2-201ENST00000324938 SLC30A10Q6XR72 485 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 C1orf186Q6ZWK4 172 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 TPH2Q8IWU9 490 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 WDR11Q9BZH6 1224 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 PLCB1Q9NQ66 1216 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 FBXO28Q9NVF7 368 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 L1RE1Q9UN81 338 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 ASNSP08243 561 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 HDXQ7Z353 690 aa23.54■■□□□ 1.36
LIMS2-201ENST00000324938 MSL3Q8N5Y2 521 aaKnown RBP23.54■■□□□ 1.36
LIMS2-201ENST00000324938 METTL14Q9HCE5 456 aaKnown RBP23.54■■□□□ 1.36
LIMS2-201ENST00000324938 ZNF185O15231 689 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 AKAP3O75969 853 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 FAM13AO94988 1023 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 XRCC5P13010 732 aaKnown RBP23.53■■□□□ 1.36
LIMS2-201ENST00000324938 RAPGEF1Q13905 1077 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 DPY19L2P1Q6NXN4 242 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 RNF10Q8N5U6 811 aaKnown RBP23.53■■□□□ 1.36
LIMS2-201ENST00000324938 CAGE1Q8TC20 777 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 BCAS3Q9H6U6 928 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 LUC7LQ9NQ29 371 aaKnown RBP23.53■■□□□ 1.36
LIMS2-201ENST00000324938 ZMYM2Q9UBW7 1377 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 TARSL2A2RTX5 802 aaKnown RBP23.53■■□□□ 1.36
LIMS2-201ENST00000324938 PDE2AO00408 941 aaPredicted RBP23.53■■□□□ 1.36
LIMS2-201ENST00000324938 PTGER2P43116 358 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 IQCEQ6IPM2 695 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 B3GNT9Q6UX72 402 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 ZNF577Q9BSK1 485 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 SALL4Q9UJQ4 1053 aa23.53■■□□□ 1.36
LIMS2-201ENST00000324938 EPB41P11171 864 aaKnown RBP23.52■■□□□ 1.36
LIMS2-201ENST00000324938 RASSF7Q02833 373 aa23.52■■□□□ 1.36
LIMS2-201ENST00000324938 ZNF572Q7Z3I7 529 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-201ENST00000324938 UBE4BO95155 1302 aa23.52■■□□□ 1.36
LIMS2-201ENST00000324938 ARP10275 920 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 MCM3P25205 808 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 OAS2P29728 719 aaKnown RBP23.51■■□□□ 1.35
LIMS2-201ENST00000324938 HSD17B4P51659 736 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 EPHA7Q15375 998 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 ASIC2Q16515 512 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 SLC18A3Q16572 532 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 NFIL3Q16649 462 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 CREG2Q8IUH2 290 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 NOX5Q96PH1 765 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 UNC45AQ9H3U1 944 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 SEL1LQ9UBV2 794 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 PRDM4Q9UKN5 801 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 WNT10BO00744 389 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 ICAM1P05362 532 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 POLD1P28340 1107 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 KCNA1Q09470 495 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 FAM133AQ8N9E0 248 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 NACC1Q96RE7 527 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 TEKT3Q9BXF9 490 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 PARVGQ9HBI0 331 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 POLD4Q9HCU8 107 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 KCND2Q9NZV8 630 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 HYOU1Q9Y4L1 999 aa23.51■■□□□ 1.35
LIMS2-201ENST00000324938 TGFB1I1O43294 461 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 TCP1P17987 556 aaKnown RBP23.5■■□□□ 1.35
LIMS2-201ENST00000324938 ZNF131P52739 623 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 ITIH3Q06033 890 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 CXCL9Q07325 125 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 KLHL30Q0D2K2 578 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 EXOC3L4Q17RC7 722 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 SAMD1Q6SPF0 538 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-201ENST00000324938 MYCT1Q8N699 235 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 SFI1A8K8P3 1242 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 SLC9A1P19634 815 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 CASP4P49662 377 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 NBPF9Q3BBW0 867 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 SLC35C1Q96A29 364 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 DRC1Q96MC2 740 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 OSBPL9Q96SU4 736 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 MXRA8Q9BRK3 442 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 WRAP73Q9P2S5 460 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-201ENST00000324938 CCPG1Q9ULG6 757 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 ODF2LQ9ULJ1 636 aa23.5■■□□□ 1.35
LIMS2-201ENST00000324938 ZNF536O15090 1300 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 RPTORQ8N122 1335 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 SHTN1A0MZ66 631 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 ZBTB39O15060 712 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 ACTN1P12814 892 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 UCHL3P15374 230 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 PON1P27169 355 aa23.49■■□□□ 1.35
LIMS2-201ENST00000324938 NMT1P30419 496 aaKnown RBP23.49■■□□□ 1.35
LIMS2-201ENST00000324938 DCAF17Q5H9S7 520 aaPredicted RBP23.49■■□□□ 1.35
LIMS2-201ENST00000324938 KLHDC7AQ5VTJ3 777 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms