RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GFPT2O94808 682 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 KIF4AO95239 1232 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 ABCB4P21439 1286 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 CLK2P49760 499 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 PRPF4BQ13523 1007 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 TRMT1LQ7Z2T5 733 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 SLF2Q8IX21 1173 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 PIGOQ8TEQ8 1089 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 U2AF1L4Q8WU68 220 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 UBLCP1Q8WVY7 318 aaPredicted RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 RGL1Q9NZL6 768 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 ABCB11O95342 1321 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 SART1O43290 800 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 BBOX1O75936 387 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 PON1P27169 355 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 HSD17B3P37058 310 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 EXOC3L4Q17RC7 722 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 CRY2Q49AN0 593 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 OSGEPQ9NPF4 335 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 CHORDC1Q9UHD1 332 aaPredicted RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 NAGPAQ9UK23 515 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 EPB41P11171 864 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 GBP6Q6ZN66 633 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 LRRC27Q9C0I9 530 aa21.72■■□□□ 1.07
CRLF3-201ENST00000324238 LUC7LQ9NQ29 371 aaKnown RBP21.72■■□□□ 1.07
CRLF3-201ENST00000324238 GABPAQ06546 454 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 UAP1Q16222 522 aaPredicted RBP21.71■■□□□ 1.07
CRLF3-201ENST00000324238 CEP63Q96MT8 703 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 ANO3Q9BYT9 981 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 AIPL1Q9NZN9 384 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 TSKSQ9UJT2 592 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 MYH7BA7E2Y1 1941 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 ATP2C2O75185 946 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 EEF2P13639 858 aaKnown RBP21.71■■□□□ 1.07
CRLF3-201ENST00000324238 GLE1Q53GS7 698 aaKnown RBP21.71■■□□□ 1.07
CRLF3-201ENST00000324238 TBC1D22AQ8WUA7 517 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
CRLF3-201ENST00000324238 EDEM3Q9BZQ6 932 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 BHMT2Q9H2M3 363 aa21.71■■□□□ 1.07
CRLF3-201ENST00000324238 KRIT1O00522 736 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SNHG28P0DPA3 235 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SMARCA1P28370 1054 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 ECHS1P30084 290 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SLC12A3P55017 1021 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 UBXN2AP68543 259 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SKOR1P84550 965 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 IFT88Q13099 833 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 GIT2Q14161 759 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SEPT2Q15019 361 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 ATP6V1G3Q96LB4 118 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 SEPT11Q9NVA2 429 aaKnown RBP21.7■■□□□ 1.06
CRLF3-201ENST00000324238 NOC2LQ9Y3T9 749 aaKnown RBP21.7■■□□□ 1.06
CRLF3-201ENST00000324238 GAKO14976 1311 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 DDTLA6NHG4 134 aaPredicted RBP21.7■■□□□ 1.06
CRLF3-201ENST00000324238 TTI1O43156 1089 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 CHMP2AO43633 222 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 GCNT3O95395 438 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 TNNC1P63316 161 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 ZC2HC1CQ53FD0 456 aaPredicted RBP21.7■■□□□ 1.06
CRLF3-201ENST00000324238 ODF2Q5BJF6 829 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 DAAM2Q86T65 1068 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
CRLF3-201ENST00000324238 H0YHG0 523 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 CTNNA1P35221 906 aaKnown RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 MKRN4PQ13434 485 aaPredicted RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 COG2Q14746 738 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 LLGL1Q15334 1064 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 PEX26Q7Z412 305 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 OTUD6BQ8N6M0 293 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 RDH13Q8NBN7 331 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 CCT8L2Q96SF2 557 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 TRIM51Q9BSJ1 452 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 RUSC1Q9BVN2 902 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 TAF1DQ9H5J8 278 aaPredicted RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 FBXL5Q9UKA1 691 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 PLS1Q14651 629 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 AFPP02771 609 aaKnown RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 ZNF211Q13398 564 aaPredicted RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 DPY19L2P1Q6NXN4 242 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 ZNF473Q8WTR7 871 aaKnown RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 SYN2Q92777 582 aaPredicted RBP21.69■■□□□ 1.06
CRLF3-201ENST00000324238 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 GCNT4Q9P109 453 aa21.69■■□□□ 1.06
CRLF3-201ENST00000324238 FAM86B1E9PN63 330 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 FAM86B2P0C5J1 330 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 KCNV1Q6PIU1 500 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 GLYCTKQ8IVS8 523 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 NUCKS1Q9H1E3 243 aaKnown RBP21.68■■□□□ 1.06
CRLF3-201ENST00000324238 POLRMTO00411 1230 aaKnown RBP21.68■■□□□ 1.06
CRLF3-201ENST00000324238 PPP1R37O75864 691 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 TNFRSF8P28908 595 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 NMT1P30419 496 aaKnown RBP21.68■■□□□ 1.06
CRLF3-201ENST00000324238 HNRNPH1P31943 449 aaKnown RBP21.68■■□□□ 1.06
CRLF3-201ENST00000324238 NOVP48745 357 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 PTGISQ16647 500 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 KNOP1Q1ED39 458 aaKnown RBP21.68■■□□□ 1.06
CRLF3-201ENST00000324238 APOBEC3HQ6NTF7 200 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms