RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 LIMA1Q9UHB6 759 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 SLIT1O75093 1534 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 H0Y3Z8 333 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 SMIM24O75264 130 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 MAGOHP61326 146 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 GRM1Q13255 1194 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 SLFN12Q8IYM2 578 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 MAGOHBQ96A72 148 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 POLLQ9UGP5 575 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 CARSP49589 748 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 ANKFY1Q9P2R3 1169 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 JCADQ9P266 1359 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 AFF2P51816 1311 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 LSP1P33241 339 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 KAZNQ674X7 775 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 IL17RAQ96F46 866 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 KRT19P08727 400 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 SLC9A1P19634 815 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 GCLMP48507 274 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 STAT2P52630 851 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 SMTNP53814 917 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 GNPTABQ3T906 1256 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 GJB7Q6PEY0 223 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 ZNF473Q8WTR7 871 aaKnown RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 CCDC17Q96LX7 622 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 ZIM3Q96PE6 472 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 IMPG2Q9BZV3 1241 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 KCNQ5Q9NR82 932 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 LARSQ9P2J5 1176 aaKnown RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 MYBL1P10243 752 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 PARP9Q8IXQ6 854 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 ELMO3Q96BJ8 720 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 ARHGAP23Q9P227 1491 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 RNF225M0QZC1 329 aaPredicted RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 ZC2HC1CQ53FD0 456 aaPredicted RBP16.55■□□□□ 0.24
VARS2-201ENST00000321897 HVCN1Q96D96 273 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 DYDC2Q96IM9 177 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 TRIM7Q9C029 511 aa16.55■□□□□ 0.24
VARS2-201ENST00000321897 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 CCDC38Q502W7 563 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 STX2P32856 288 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 MTMR3Q13615 1198 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
VARS2-201ENST00000321897 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 ANKRD26Q9UPS8 1709 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 ZNF18P17022 549 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 DDX42Q86XP3 938 aaKnown RBP eCLIP16.54■□□□□ 0.24
VARS2-201ENST00000321897 POMGNT1Q8WZA1 660 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
VARS2-201ENST00000321897 TSKSQ9UJT2 592 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 PCDHAC2Q9Y5I4 1007 aa16.54■□□□□ 0.24
VARS2-201ENST00000321897 RSPH10B2B2RC85 870 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 RSPH10BP0C881 870 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 CCSER1Q9C0I3 900 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 SH3GLB2Q9NR46 395 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
VARS2-201ENST00000321897 TRPC5Q9UL62 973 aaPredicted RBP16.53■□□□□ 0.24
VARS2-201ENST00000321897 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 ABCB11O95342 1321 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 LRRIQ4A6NIV6 560 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 HNRNPDLO14979 420 aaKnown RBP16.53■□□□□ 0.24
VARS2-201ENST00000321897 PDHA1P08559 390 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 BCRP11274 1271 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 PEX3P56589 373 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 RBM12Q9NTZ6 932 aaKnown RBP16.53■□□□□ 0.24
VARS2-201ENST00000321897 GMNCA6NCL1 334 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 GNA14O95837 355 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 COPB2P35606 906 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 POLE2P56282 527 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 OSTNP61366 133 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 TRAF1Q13077 416 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 TAF11Q15544 211 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms