RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DEXIO95424 95 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 KRT76Q01546 638 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 LPIN1Q14693 890 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 FBXO47Q5MNV8 452 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 SWSAP1Q6NVH7 229 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 TSHZ1Q6ZSZ6 1077 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
TPM1-203ENST00000317516 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
TPM1-203ENST00000317516 ATP8B4Q8TF62 1192 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 SAMD11Q96NU1 681 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 SUGCTQ9HAC7 445 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 MTUS1Q9ULD2 1270 aa20.14■□□□□ 0.81
TPM1-203ENST00000317516 SMIM35A0A1B0GVV1 85 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 PSAPP07602 524 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 KLRC1P26715 233 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 ZNF484Q5JVG2 852 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 GALNT17Q6IS24 598 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 MTHFD1LQ6UB35 978 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 FAM43BQ6ZT52 329 aaPredicted RBP20.13■□□□□ 0.81
TPM1-203ENST00000317516 CKAP2LQ8IYA6 745 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 SP7Q8TDD2 431 aaPredicted RBP20.13■□□□□ 0.81
TPM1-203ENST00000317516 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 PCDHA10Q9Y5I2 948 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 TRPV2Q9Y5S1 764 aa20.13■□□□□ 0.81
TPM1-203ENST00000317516 ADAMTS3O15072 1205 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 LPXNO60711 386 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 CDKL5O76039 1030 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 STK3Q13188 491 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 SPRED2Q7Z698 418 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 CCDC60Q8IWA6 550 aaPredicted RBP20.12■□□□□ 0.81
TPM1-203ENST00000317516 FBXO22Q8NEZ5 403 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 TRAPPC12Q8WVT3 735 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
TPM1-203ENST00000317516 FTHL17Q9BXU8 183 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 CELF4Q9BZC1 486 aaKnown RBP20.12■□□□□ 0.81
TPM1-203ENST00000317516 PCDHA4Q9UN74 947 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 COG5Q9UP83 839 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
TPM1-203ENST00000317516 GBF1Q92538 1859 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 COL1A2P08123 1366 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 ENPP3O14638 875 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 KRT40Q6A162 431 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 GDPD5Q8WTR4 605 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 BBXQ8WY36 941 aaPredicted RBP20.11■□□□□ 0.81
TPM1-203ENST00000317516 ZBTB10Q96DT7 871 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 UIMC1Q96RL1 719 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 MAFBQ9Y5Q3 323 aaPredicted RBP20.11■□□□□ 0.81
TPM1-203ENST00000317516 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
TPM1-203ENST00000317516 EYSQ5T1H1 3165 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 DOCK5Q9H7D0 1870 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 WDR64B1ANS9 1081 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 ANAPC15P60006 121 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 ANKRD1Q15327 319 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 RIT2Q99578 217 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 C17orf80Q9BSJ5 609 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 SLKQ9H2G2 1235 aaPredicted RBP20.1■□□□□ 0.81
TPM1-203ENST00000317516 CHD7Q9P2D1 2997 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
TPM1-203ENST00000317516 KDM3AQ9Y4C1 1321 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 XBP1P17861 261 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 CD52P31358 61 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 TMEM62Q0P6H9 643 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 PTPROQ16827 1216 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 ODR4Q5SWX8 454 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 FIBCD1Q8N539 461 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 TBCKQ8TEA7 893 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 HLA-CQ95604 372 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 FAM167AQ96KS9 214 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
TPM1-203ENST00000317516 GABBR1Q9UBS5 961 aa20.09■□□□□ 0.81
TPM1-203ENST00000317516 IGSF9BQ9UPX0 1349 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 RBAK-RBAKDNI3L0D1 243 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 MSH4O15457 936 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 GAS7O60861 476 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 SFNP31947 248 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 PAK2Q13177 524 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 EPC2Q52LR7 807 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 DAGLBQ8NCG7 672 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 LENG9Q96B70 501 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 DISC1Q9NRI5 854 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 NRBP2Q9NSY0 501 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 PADI3Q9ULW8 664 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 RWDD3Q9Y3V2 267 aa20.08■□□□□ 0.81
TPM1-203ENST00000317516 KAT6AQ92794 2004 aa20.08■□□□□ 0.8
TPM1-203ENST00000317516 MAGEB2O15479 319 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 ATP4AP20648 1035 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 JAK3P52333 1124 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 Q4G0T1 1027 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 TRMT1LQ7Z2T5 733 aaKnown RBP20.07■□□□□ 0.8
TPM1-203ENST00000317516 TMEM192Q8IY95 271 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 KIAA0319LQ8IZA0 1049 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 TEKT3Q9BXF9 490 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
TPM1-203ENST00000317516 GINS2Q9Y248 185 aa20.07■□□□□ 0.8
TPM1-203ENST00000317516 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
TPM1-203ENST00000317516 CYP3A7-CYP3A51PA0A087WV96 503 aa20.06■□□□□ 0.8
TPM1-203ENST00000317516 H3BNC9 293 aa20.06■□□□□ 0.8
TPM1-203ENST00000317516 STAG3L1P0CL83 205 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms