RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 KLK7P49862 253 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PMS2P54278 862 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ATP2B2Q01814 1243 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RNASELQ05823 741 aaKnown RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 HEATR3Q7Z4Q2 680 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RAD54LQ92698 747 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 DCP1AQ9NPI6 582 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 STXBP3O00186 592 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 CHN1P15882 459 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 STAT1P42224 750 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PTENP60484 403 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 NR1H3Q13133 447 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ADAM9Q13443 819 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SLC30A9Q6PML9 568 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 APBB1IPQ7Z5R6 666 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FRMD5Q7Z6J6 570 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FBXO41Q8TF61 875 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SDR42E1Q8WUS8 393 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PFASO15067 1338 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PITPNM2Q9BZ72 1349 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PP2D1A8MPX8 630 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SCP2P22307 547 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 BCAMP50895 628 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PARP6Q2NL67 630 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PPP1R18Q6NYC8 613 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PPP1R21Q6ZMI0 780 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ARHGEF18Q6ZSZ5 1173 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FAM228AQ86W67 206 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 UBL4BQ8N7F7 174 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ERMNQ8TAM6 284 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ACSBG1Q96GR2 724 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 MS4A14Q96JA4 679 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 PLIN2Q99541 437 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 BLOC1S4Q9NUP1 217 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 M0R2N6 131 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ADAMTS2O95450 1211 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 LMNAP02545 664 aaKnown RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FGGP02679 453 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FESP07332 822 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RFX1P22670 979 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 TFAP4Q01664 338 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 BNIP1Q12981 228 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 CADPS2Q86UW7 1296 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 LRRC34Q8IZ02 419 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF444Q8N0Y2 327 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SH3TC2Q8TF17 1288 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 THOC1Q96FV9 657 aaKnown RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 NAF1Q96HR8 494 aaKnown RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 MKNK2Q9HBH9 465 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 AFF2P51816 1311 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FAM205AQ6ZU69 1335 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SMCO2A6NFE2 343 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 DIAPH2O60879 1101 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 KRT18P05783 430 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 XRCC5P13010 732 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 ATP2A2P16615 1042 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MAN1A1P33908 653 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 COPS2P61201 443 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 BZW1Q7L1Q6 419 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CYFIP1Q7L576 1253 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 OR2W6PQ8NHA6 318 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TPCN2Q8NHX9 752 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MAIP1Q8WWC4 291 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 HES6Q96HZ4 224 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 SYNGAP1Q96PV0 1343 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 ELAC2Q9BQ52 826 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 AMACRQ9UHK6 382 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 ACTL7BQ9Y614 415 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 UBR1Q8IWV7 1749 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 C1orf167Q5SNV9 1468 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MYMKA6NI61 221 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 SLC16A3O15427 465 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MKRN4PQ13434 485 aaPredicted RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 METTL13Q8N6R0 699 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 FAM212AQ96EL1 285 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 DTNBP1Q96EV8 351 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 FOXP3Q9BZS1 431 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 STOML1Q9UBI4 398 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PNMA2Q9UL42 364 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PASKQ96RG2 1323 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PALM3A6NDB9 673 aaPredicted RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PDXKO00764 312 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 BAG3O95817 575 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 GSTA2P09210 222 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CNGA1P29973 690 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 NCALDP61601 193 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 POU5F1Q01860 360 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC15Q0P6D6 951 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CALCRLQ16602 461 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 EXOC3L4Q17RC7 722 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 SPDYAQ5MJ70 313 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 DUPD1Q68J44 220 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 NAIF1Q69YI7 327 aaPredicted RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 FAM133AQ8N9E0 248 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TBC1D16Q8TBP0 767 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TUBB6Q9BUF5 446 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 AFPP02771 609 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 IBSPP21815 317 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms