RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 PLS1Q14651 629 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TBC1D10BQ4KMP7 808 aaPredicted RBP16.25■□□□□ 0.19
CLK4-201ENST00000316308 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TCERG1LQ5VWI1 586 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
CLK4-201ENST00000316308 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLK4-201ENST00000316308 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TMOD2Q9NZR1 351 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 SNX12Q9UMY4 172 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 ZMYM2Q9UBW7 1377 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 CETN3O15182 167 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 CYP3A4P08684 503 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 MARSP56192 900 aaKnown RBP16.25■□□□□ 0.19
CLK4-201ENST00000316308 SLC7A5Q01650 507 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 UNC45AQ9H3U1 944 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 TISP43B9A030 160 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 WNT10BO00744 389 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 LRRN2O75325 713 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 FTCDO95954 541 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 RNASE9P60153 205 aaKnown RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 FIZ1Q96SL8 496 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 RANBP17Q9H2T7 1088 aaKnown RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 VCPKMTQ9H867 229 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 PGAP2Q9UHJ9 254 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 DMGDHQ9UI17 866 aaKnown RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 TRAF3IP3Q9Y228 551 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 NR3C1P04150 777 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 NAP1L1P55209 391 aaKnown RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 PTK2Q05397 1052 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 CXCL9Q07325 125 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 CASP8Q14790 479 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 KLHDC7AQ5VTJ3 777 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 C1orf186Q6ZWK4 172 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 CPXCR1Q8N123 301 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 HNRNPLLQ8WVV9 542 aaKnown RBP16.24■□□□□ 0.19
CLK4-201ENST00000316308 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
CLK4-201ENST00000316308 EYA4O95677 639 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 ITGB5P18084 799 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 PON1P27169 355 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 CAP2P40123 477 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 EDRF1Q3B7T1 1238 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 MYCT1Q8N699 235 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 RIN2Q8WYP3 895 aaPredicted RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 ARMCX3Q9UH62 379 aaPredicted RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 ZNF536O15090 1300 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 ZNF571Q7Z3V5 609 aaPredicted RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 TRIM58Q8NG06 486 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 SLC35C1Q96A29 364 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 POLR3CQ9BUI4 534 aaPredicted RBP16.23■□□□□ 0.19
CLK4-201ENST00000316308 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 WDR11Q9BZH6 1224 aa16.23■□□□□ 0.19
CLK4-201ENST00000316308 RBBP6Q7Z6E9 1792 aaKnown RBP16.22■□□□□ 0.19
CLK4-201ENST00000316308 GAS7O60861 476 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 TACC1O75410 805 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 UCHL3P15374 230 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 EPS15P42566 896 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 IRF2BP2Q7Z5L9 587 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 EHBP1Q8NDI1 1231 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 ZSWIM2Q8NEG5 633 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 SLC5A5Q92911 643 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 JRKLQ9Y4A0 524 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 ATP8B1O43520 1251 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 TBCAO75347 108 aaKnown RBP16.22■□□□□ 0.19
CLK4-201ENST00000316308 PALMO75781 387 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 ZNF577Q9BSK1 485 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 SIX2Q9NPC8 291 aa16.22■□□□□ 0.19
CLK4-201ENST00000316308 ANO9A1A5B4 782 aa16.21■□□□□ 0.19
CLK4-201ENST00000316308 SERPING1P05155 500 aa16.21■□□□□ 0.19
CLK4-201ENST00000316308 KLHL30Q0D2K2 578 aa16.21■□□□□ 0.19
CLK4-201ENST00000316308 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
CLK4-201ENST00000316308 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
CLK4-201ENST00000316308 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 PDXKO00764 312 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 PJA2O43164 708 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 EPHA7Q15375 998 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 DAW1Q8N136 415 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 LXNQ9BS40 222 aa16.21■□□□□ 0.18
CLK4-201ENST00000316308 ZSCAN5CA6NGD5 496 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms