RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CYP11B2P19099 503 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 NR2F2P24468 414 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 CASP5P51878 434 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 EIF6P56537 245 aaKnown RBP14.68□□□□□ -0.06
SKA3-202ENST00000314759 WLSQ5T9L3 541 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 FUKQ8N0W3 1084 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 TPCN2Q8NHX9 752 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 SPAG5Q96R06 1193 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 JMJD4Q9H9V9 463 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 BCCIPQ9P287 314 aaKnown RBP eCLIP14.68□□□□□ -0.06
SKA3-202ENST00000314759 AMACRQ9UHK6 382 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 DAPK3O43293 454 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 KIF1CO43896 1103 aaKnown RBP14.68□□□□□ -0.06
SKA3-202ENST00000314759 RHBDL3P58872 404 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 EDRF1Q3B7T1 1238 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 ASPRV1Q53RT3 343 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 ARSHQ5FYA8 562 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 CYB5D1Q6P9G0 228 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 CLEC10AQ8IUN9 316 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 UBLCP1Q8WVY7 318 aaPredicted RBP14.68□□□□□ -0.06
SKA3-202ENST00000314759 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
SKA3-202ENST00000314759 NARFQ9UHQ1 456 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 LEMD3Q9Y2U8 911 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 PNMA6FA0A0J9YX94 578 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 TMCO5BA8MYB1 307 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 KRIT1O00522 736 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 SNHG28P0DPA3 235 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 PON1P27169 355 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 BIRC3Q13489 604 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 IFI16Q16666 785 aaKnown RBP14.67□□□□□ -0.06
SKA3-202ENST00000314759 RUFY4Q6ZNE9 571 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 ZNF804AQ7Z570 1209 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 PARP9Q8IXQ6 854 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 ZHX3Q9H4I2 956 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.67□□□□□ -0.06
SKA3-202ENST00000314759 KDM3AQ9Y4C1 1321 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 BZW2Q9Y6E2 419 aaKnown RBP14.67□□□□□ -0.06
SKA3-202ENST00000314759 ATAD5Q96QE3 1844 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 DCDC2CA8MYV0 355 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 OPLAHO14841 1288 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 NF2P35240 595 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 CDR1P51861 262 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 PLCB4Q15147 1175 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 SCLT1Q96NL6 688 aa14.67□□□□□ -0.06
SKA3-202ENST00000314759 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
SKA3-202ENST00000314759 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 BYSLQ13895 437 aaKnown RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 E2F5Q15329 346 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 ODF2Q5BJF6 829 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 PEX26Q7Z412 305 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 MIEF2Q96C03 454 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 LRRC4CQ9HCJ2 640 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 TPX2Q9ULW0 747 aaKnown RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 THRAP3Q9Y2W1 955 aaKnown RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 GOLGA6L7A0A1B0GV03 622 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 RGL2O15211 777 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 PPP2R2AP63151 447 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 SNCBQ16143 134 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 EXOC3L4Q17RC7 722 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 SLFN11Q7Z7L1 901 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 CUL5Q93034 780 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 ARMCX3Q9UH62 379 aaPredicted RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 NENFQ9UMX5 172 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 NOVA2Q9UNW9 492 aaKnown RBP14.66□□□□□ -0.06
SKA3-202ENST00000314759 STXBP5LQ9Y2K9 1186 aa14.66□□□□□ -0.06
SKA3-202ENST00000314759 CCDC188H7C350 402 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 TTI1O43156 1089 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 PRKCIP41743 596 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 DRP2Q13474 957 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 ANKRD20A8PQ5CZ79 823 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 TMC3Q7Z5M5 1100 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 FRMD5Q7Z6J6 570 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 C3orf20Q8ND61 904 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 CELF4Q9BZC1 486 aaKnown RBP14.65□□□□□ -0.06
SKA3-202ENST00000314759 SBF2Q86WG5 1849 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 MED24O75448 989 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 FLOT1O75955 427 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
SKA3-202ENST00000314759 KRT18P05783 430 aaKnown RBP14.65□□□□□ -0.06
SKA3-202ENST00000314759 GCFC2P16383 781 aaKnown RBP14.65□□□□□ -0.06
SKA3-202ENST00000314759 HOXD13P35453 343 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 STAT3P40763 770 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 AGBL2Q5U5Z8 902 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 PPP1R18Q6NYC8 613 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 SEC14L1Q92503 715 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 RAPGEF5Q92565 580 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 SEC16BQ96JE7 1060 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 PSTPIP2Q9H939 334 aa14.65□□□□□ -0.06
SKA3-202ENST00000314759 VEZTQ9HBM0 779 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms