RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 INF2Q27J81 1249 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 ZNF746Q6NUN9 644 aaPredicted RBP18.47■□□□□ 0.55
LSM1-201ENST00000311351 SWSAP1Q6NVH7 229 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 FAM117BQ6P1L5 589 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 SPRED2Q7Z698 418 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 RPAINQ86UA6 219 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 FAM177A1Q8N128 213 aaPredicted RBP18.47■□□□□ 0.55
LSM1-201ENST00000311351 OXER1Q8TDS5 423 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 SEPT8Q92599 483 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 TCEAL9Q9UHQ7 104 aa18.47■□□□□ 0.55
LSM1-201ENST00000311351 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 CHMP2AO43633 222 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 TLL1O43897 1013 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 JAK2O60674 1132 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 EFCAB14O75071 495 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 ATP4AP20648 1035 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 SLC26A2P50443 739 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 ADGRE1Q14246 886 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 KRT25Q7Z3Z0 450 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 NSUN7Q8NE18 718 aaKnown RBP18.46■□□□□ 0.55
LSM1-201ENST00000311351 ATP8B4Q8TF62 1192 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 SLC5A5Q92911 643 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 CERS4Q9HA82 394 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 CDY2AQ9Y6F7 541 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 UNC80Q8N2C7 3258 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
LSM1-201ENST00000311351 TRANK1O15050 2925 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 GAS7O60861 476 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 PSAPP07602 524 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 FOSBP53539 338 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 MRPS6P82932 125 aaKnown RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 TMEM62Q0P6H9 643 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 LPIN1Q14693 890 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 Q4G0T1 1027 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 LRCH2Q5VUJ6 765 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 TRMT1LQ7Z2T5 733 aaKnown RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 RSPH3Q86UC2 560 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 SMAP1Q8IYB5 467 aaPredicted RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 MYOCDQ8IZQ8 938 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 GAS2L1Q99501 681 aaPredicted RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 ZBED2Q9BTP6 218 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 TEKT3Q9BXF9 490 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 IFIH1Q9BYX4 1025 aaKnown RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 UNC45AQ9H3U1 944 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 GABBR1Q9UBS5 961 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 SAMM50Q9Y512 469 aa18.45■□□□□ 0.54
LSM1-201ENST00000311351 MAFBQ9Y5Q3 323 aaPredicted RBP18.45■□□□□ 0.54
LSM1-201ENST00000311351 CYP3A7-CYP3A51PA0A087WV96 503 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 FAM205CA6NFA0 338 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 EPOPA6NHQ4 379 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 WDR64B1ANS9 1081 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 KIF28PB7ZC32 967 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 SLC37A4O43826 429 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 HBP1O60381 514 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 GJB5O95377 273 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 XBP1P17861 261 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 CYP3A7P24462 503 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 TAP1Q03518 808 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 LETM2Q2VYF4 491 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 MTHFD1LQ6UB35 978 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 CKAP2LQ8IYA6 745 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 USP38Q8NB14 1042 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 TNPO1Q92973 898 aaKnown RBP18.44■□□□□ 0.54
LSM1-201ENST00000311351 MBOAT7Q96N66 472 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 KIF2CQ99661 725 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 PCDHA2Q9Y5H9 948 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 PCDHA10Q9Y5I2 948 aa18.44■□□□□ 0.54
LSM1-201ENST00000311351 COL1A2P08123 1366 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 ZBTB42B2RXF5 422 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 PSMD10O75832 226 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 AMHP03971 560 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 NR5A1Q13285 461 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 UGCGQ16739 394 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 EARS2Q5JPH6 523 aaKnown RBP18.43■□□□□ 0.54
LSM1-201ENST00000311351 FBXO47Q5MNV8 452 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 MOXD1Q6UVY6 613 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 PIK3AP1Q6ZUJ8 805 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 ETNPPLQ8TBG4 499 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 WASF1Q92558 559 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 RIT2Q99578 217 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 DISC1Q9NRI5 854 aa18.43■□□□□ 0.54
LSM1-201ENST00000311351 DDX25Q9UHL0 483 aaKnown RBP18.43■□□□□ 0.54
LSM1-201ENST00000311351 SMIM35A0A1B0GVV1 85 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
LSM1-201ENST00000311351 RFXAPO00287 272 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 ZNF862O60290 1169 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 IGFBP4P22692 258 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 KLRC1P26715 233 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 NEK8Q86SG6 692 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 APBB2Q92870 758 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 TRPV2Q9Y5S1 764 aa18.42■□□□□ 0.54
LSM1-201ENST00000311351 PRRC2BQ5JSZ5 2229 aaKnown RBP18.42■□□□□ 0.54
LSM1-201ENST00000311351 C22orf31O95567 290 aa18.41■□□□□ 0.54
LSM1-201ENST00000311351 JAK3P52333 1124 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms